CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava46146.m1
(
Manihot esculenta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
cassava46146.m1
T284309_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB51
M07010_2.00
Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW
WRGTWGGTRRRNNNDNDDNDN
Dap-seq
OMalley et al.(2016)
MYB51_col_a
0.725
0.774
MYB106
M11040_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G01140_01
0.674
0.806
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava46146.m1
Myb
14
61
KGAWTADEDQKLIAYIKEHGEGGWRTLPQKAGLQRCGKSCRLRWANYL
cassava46146.m1
Myb
67
112
RGEFSKEEEQKIIELHASLGNRWSAIARHLPKRTDNEIKNYWNTHL
Links
Other
Myb/SANT
family TFs
Other
Manihot esculenta
TFs
171 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy