cassava5261.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava5261.m1 T284325_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava5261.m1 Myb 5 52
cassava5261.m1 Myb 58 103

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava5263.m1 Manihot esculenta cassava5263.m1 N 0.843
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.792
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.777
POPTR_0011s04010 Populus trichocarpa POPTR_0011s04010 N 0.758
TCM_033016 Theobroma cacao TCM_033016 N 0.745
Gorai.013G143100 Gossypium raimondii Gorai.013G143100 N 0.742
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.739
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.739
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.738
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N 0.736
Gorai.013G143000 Gossypium raimondii Gorai.013G143000 N 0.736
POPTR_0011s04020 Populus trichocarpa POPTR_0011s04020 N 0.734
MDP0000131822 Malus domestica MDP0000131822 I 0.734
MDP0000155426 Malus domestica MDP0000155426 I 0.730
29933.m001454 Ricinus communis 29933.m001454 N 0.729
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N 0.722
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.722
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.720
TCM_033015 Theobroma cacao TCM_033015 N 0.720
MDP0000289283 Malus domestica MDP0000289283 I 0.717
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.714
Eucgr.D00037 Eucalyptus grandis Eucgr.D00037 N 0.714
MDP0000407613 Malus domestica MDP0000407613 N 0.713
POPTR_0004s02570 Populus trichocarpa POPTR_0004s02570 I 0.712
TCM_030020 Theobroma cacao TCM_030020 I 0.710
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N 0.710
SapurV1A.0028s0640 Salix purpurea SapurV1A.0028s0640 N 0.709
Gorai.013G143200 Gossypium raimondii Gorai.013G143200 I 0.707
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.707
Pm009880 Prunus mume Pm009880 N 0.707
POPTR_0011s04000 Populus trichocarpa POPTR_0011s04000 N 0.698
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.689
TCM_007865 Theobroma cacao TCM_007865 I 0.688
Pm015302 Prunus mume Pm015302 N 0.687
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.687
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.686
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.686
Eucgr.L02563 Eucalyptus grandis Eucgr.L02563 N 0.681
TCM_007868 Theobroma cacao TCM_007868 I 0.680
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.680
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.680
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.677
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.674
Eucgr.D00044 Eucalyptus grandis Eucgr.D00044 N 0.673
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.671
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.670
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.670
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N 0.667
Eucgr.I00828 Eucalyptus grandis Eucgr.I00828 N 0.666
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.664
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.663
Ciclev10018311m.g Citrus clementina Ciclev10018311m.g I 0.662
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.662
Ciclev10017435m.g Citrus clementina Ciclev10017435m.g I 0.662