cassava5263.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava5263.m1 T284326_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava5263.m1 Myb 5 52
cassava5263.m1 Myb 58 101

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava5261.m1 Manihot esculenta cassava5261.m1 N 0.843
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.760
POPTR_0011s04010 Populus trichocarpa POPTR_0011s04010 N 0.758
Gorai.013G143100 Gossypium raimondii Gorai.013G143100 N 0.758
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.746
MDP0000131822 Malus domestica MDP0000131822 I 0.743
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.738
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.738
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.736
Gorai.013G143200 Gossypium raimondii Gorai.013G143200 I 0.736
Pm009880 Prunus mume Pm009880 N 0.736
Gorai.013G143000 Gossypium raimondii Gorai.013G143000 N 0.735
TCM_033016 Theobroma cacao TCM_033016 N 0.735
29933.m001454 Ricinus communis 29933.m001454 N 0.728
MDP0000289283 Malus domestica MDP0000289283 I 0.726
POPTR_0011s04020 Populus trichocarpa POPTR_0011s04020 N 0.724
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.724
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.719
TCM_033015 Theobroma cacao TCM_033015 N 0.719
Eucgr.D00037 Eucalyptus grandis Eucgr.D00037 N 0.713
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.712
POPTR_0004s02570 Populus trichocarpa POPTR_0004s02570 I 0.711
TCM_030020 Theobroma cacao TCM_030020 I 0.709
SapurV1A.0028s0640 Salix purpurea SapurV1A.0028s0640 N 0.708
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.706
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.706
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N 0.704
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.700
MDP0000155426 Malus domestica MDP0000155426 I 0.696
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N 0.691
POPTR_0011s04000 Populus trichocarpa POPTR_0011s04000 N 0.688
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N 0.688
TCM_007865 Theobroma cacao TCM_007865 I 0.687
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.685
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.684
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.683
Pm015302 Prunus mume Pm015302 N 0.683
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N 0.682
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.682
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.681
Eucgr.L02563 Eucalyptus grandis Eucgr.L02563 N 0.680
MDP0000407613 Malus domestica MDP0000407613 N 0.679
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.676
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.673
Eucgr.D00044 Eucalyptus grandis Eucgr.D00044 N 0.672
TCM_007868 Theobroma cacao TCM_007868 I 0.670
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.667
Eucgr.I00828 Eucalyptus grandis Eucgr.I00828 N 0.665
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.661