CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.031620
(
Cucumis sativus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cucsa.031620
T284355_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.031620.1
Myb
4
53
RQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYL
Cucsa.031620.1
Myb
59
104
KGSLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFK
Links
Other
Myb/SANT
family TFs
Other
Cucumis sativus
TFs
82 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla007228
Citrullus lanatus
Cla007228
N
0.886
MDP0000252887
Malus domestica
MDP0000252887
N
0.856
gene10329-v1.0-hybrid
Fragaria vesca
gene10329-v1.0-hybrid
N
0.850
TCM_019507
Theobroma cacao
TCM_019507
N
0.849
30167.m000852
Ricinus communis
30167.m000852
N
0.840
Ciclev10011915m.g
Citrus clementina
Ciclev10011915m.g
N
0.825
mgf026496m
Mimulus guttatus
mgf026496m
N
0.823
AMTR_s00044p00233260
Amborella trichopoda
AMTR_s00044p00233260
N
0.809
GSMUA_Achr9G19380_001
Musa acuminata
GSMUA_Achr9G19380_001
N
0.805
gene08535-v1.0-hybrid
Fragaria vesca
gene08535-v1.0-hybrid
N
0.799
gene18421-v1.0-hybrid
Fragaria vesca
gene18421-v1.0-hybrid
N
0.799
PK14097.1
Cannabis sativa
PK14097.1
N
0.799
POPTR_0004s10250
Populus trichocarpa
POPTR_0004s10250
N
0.793
POPTR_0006s08610
Populus trichocarpa
POPTR_0006s08610
N
0.791
SapurV1A.0001s1780
Salix purpurea
SapurV1A.0001s1780
N
0.791
VIT_14s0083g00120
Vitis vinifera
VIT_14s0083g00120
N
0.785
Ciclev10012089m.g
Citrus clementina
Ciclev10012089m.g
N
0.783
orange1.1g018768m.g
Citrus sinensis
orange1.1g018768m.g
N
0.783
PGSC0003DMG400008834
Solanum tuberosum
PGSC0003DMG400008834
N
0.783
Solyc09g010840.1
Solanum lycopersicum
Solyc09g010840.1
N
0.783
29767.m000199
Ricinus communis
29767.m000199
N
0.782
28603.m000172
Ricinus communis
28603.m000172
N
0.782
VIT_08s0007g00410
Vitis vinifera
VIT_08s0007g00410
N
0.782
cassava35798.valid.m1
Manihot esculenta
cassava35798.valid.m1
N
0.782
GLYMA03G19030
Glycine max
GLYMA03G19030
N
0.782
MDP0000708334
Malus domestica
MDP0000708334
N
0.782
Aquca_027_00369
Aquilegia coerulea
Aquca_027_00369
N
0.782
PRUPE_ppa007753mg
Prunus persica
PRUPE_ppa007753mg
N
0.782
Pm002699
Prunus mume
Pm002699
N
0.782
GSMUA_Achr5G29070_001
Musa acuminata
GSMUA_Achr5G29070_001
N
0.781
MDP0000282792
Malus domestica
MDP0000282792
N
0.779
GLYMA18G26600
Glycine max
GLYMA18G26600
N
0.779
Lus10024392.g
Linum usitatissimum
Lus10024392.g
N
0.778
chr3.LjT11G09.150.nc
Lotus japonicus
chr3.LjT11G09.150.nc
N
0.778
POPTR_0017s13950
Populus trichocarpa
POPTR_0017s13950
N
0.777
Bostr.23794s0314
Boechera stricta
Bostr.23794s0314
N
0.775
AS1
Arabidopsis thaliana
AT2G37630
N
0.775
Bra005177
Brassica rapa
Bra005177
N
0.775
evm.TU.supercontig_333.1
Carica papaya
evm.TU.supercontig_333.1
N
0.775
fgenesh1_pm.C_scaffold_4001520
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_4001520
N
0.775
Cagra.18121s0004
Capsella grandiflora
Cagra.18121s0004
N
0.775
Bra000011
Brassica rapa
Bra000011
N
0.775
Thhalv10016830m.g
Eutrema salsugineum
Thhalv10016830m.g
N
0.775
scaffold_402408.1
Arabidopsis lyrata
scaffold_402408.1
N
0.775
Bo4g030340
Brassica oleracea
Bo4g030340
N
0.775
Bo3g031880
Brassica oleracea
Bo3g031880
N
0.775
Carubv10023471m.g
Capsella rubella
Carubv10023471m.g
N
0.771
Gorai.012G104100
Gossypium raimondii
Gorai.012G104100
N
0.771
LPERR12G13690
Leersia perrieri
LPERR12G13690
N
0.771
ORUFI12G18280
Oryza rufipogon
ORUFI12G18280
N
0.770
OBART12G16450
Oryza barthii
OBART12G16450
N
0.770
Eucgr.K03130
Eucalyptus grandis
Eucgr.K03130
N
0.770
OGLUM12G18010
Oryza glumaepatula
OGLUM12G18010
N
0.770
ORGLA12G0144700
Oryza glaberrima
ORGLA12G0144700
N
0.770
OS12G0572000
Oryza sativa
OS12G0572000
N
0.770
BGIOSGA037216
Oryza indica
BGIOSGA037216
N
0.770
ONIVA02G22170
Oryza nivara
ONIVA02G22170
N
0.770
OMERI08G15890
Oryza meridionalis
OMERI08G15890
N
0.770
Traes_5BS_E635B0A281
Triticum aestivum
Traes_5BS_E635B0A281
N
0.769
Traes_5DS_8F3BD4450
Triticum aestivum
Traes_5DS_8F3BD4450
N
0.769
OB12G23330
Oryza brachyantha
OB12G23330
N
0.769
TRIUR3_13997
Triticum urartu
TRIUR3_13997
N
0.769
GRMZM2G403620
Zea mays
GRMZM2G403620
N
0.768
Sb08g018840
Sorghum bicolor
Sb08g018840
N
0.768
BRADI4G03970
Brachypodium distachyon
BRADI4G03970
N
0.768
Pavir.Cb00486
Panicum virgatum
Pavir.Cb00486
N
0.768
TCM_021932
Theobroma cacao
TCM_021932
N
0.767
OPUNC12G14950
Oryza punctata
OPUNC12G14950
N
0.765
BGIOSGA035973
Oryza indica
BGIOSGA035973
N
0.760
Lus10025355.g
Linum usitatissimum
Lus10025355.g
N
0.752
chr3.LjT11G09.160.nc
Lotus japonicus
chr3.LjT11G09.160.nc
N
0.745
SapurV1A.0101s0440
Salix purpurea
SapurV1A.0101s0440
N
0.744
MTR_7g061550
Medicago truncatula
MTR_7g061550
N
0.743
GLYMA07G15850
Glycine max
GLYMA07G15850
N
0.743
Ca_21130
Cicer arietinum
Ca_21130
N
0.743
GLYMA18G39771
Glycine max
GLYMA18G39771
N
0.743
GSMUA_Achr9G03320_001
Musa acuminata
GSMUA_Achr9G03320_001
N
0.736
GSMUA_Achr7G10550_001
Musa acuminata
GSMUA_Achr7G10550_001
N
0.732
GSMUA_Achr9G28330_001
Musa acuminata
GSMUA_Achr9G28330_001
N
0.729
mgf026281m
Mimulus guttatus
mgf026281m
N
0.709
SELMODRAFT_140962
Selaginella moellendorffii
SELMODRAFT_140962
N
0.662
SELMODRAFT_270481
Selaginella moellendorffii
SELMODRAFT_270481
N
0.662