CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.058770
(
Cucumis sativus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cucsa.058770
T284366_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK05732.1
M01276_2.00
Cannabis sativa
HNATTCBNN
NNVGAATND
PBM
Lambert et al.(2019)
pTH11367
0.706
0.766
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.058770.1
Myb
21
72
RLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLKISHIKSHLQMYR
Links
Other
Myb/SANT
family TFs
Other
Cucumis sativus
TFs
73 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla023595
Citrullus lanatus
Cla023595
N
0.856
SapurV1A.1979s0020
Salix purpurea
SapurV1A.1979s0020
N
0.742
SapurV1A.0076s0110
Salix purpurea
SapurV1A.0076s0110
N
0.742
Cagra.0549s0004
Capsella grandiflora
Cagra.0549s0004
I
0.732
fgenesh2_kg.5__121__AT2G02060.1
Arabidopsis lyrata
fgenesh2_kg.5__121__AT2G02060.1
I
0.732
Bostr.0556s0031
Boechera stricta
Bostr.0556s0031
I
0.732
Carubv10017538m.g
Capsella rubella
Carubv10017538m.g
I
0.732
AT2G02060
Arabidopsis thaliana
AT2G02060
I
0.732
GLYMA18G14071
Glycine max
GLYMA18G14071
I
0.731
GLYMA08G41735
Glycine max
GLYMA08G41735
I
0.723
PK05732.1
Cannabis sativa
PK05732.1
D
0.706
VIT_00s1624g00010
Vitis vinifera
VIT_00s1624g00010
I
0.683
TCM_001942
Theobroma cacao
TCM_001942
I
0.683
Traes_1BL_E2629CBC1
Triticum aestivum
Traes_1BL_E2629CBC1
I
0.680
Si039234m.g
Setaria italica
Si039234m.g
I
0.680
Pavir.J33581
Panicum virgatum
Pavir.J33581
I
0.680
mgf023762m
Mimulus guttatus
mgf023762m
I
0.677
Thhalv10004791m.g
Eutrema salsugineum
Thhalv10004791m.g
I
0.672
Bra026618
Brassica rapa
Bra026618
I
0.672
POPTR_0002s05770
Populus trichocarpa
POPTR_0002s05770
I
0.671
MTR_3g450310
Medicago truncatula
MTR_3g450310
N
0.670
Bo7g080160
Brassica oleracea
Bo7g080160
I
0.666
Bra024836
Brassica rapa
Bra024836
I
0.666
Bo2g134900
Brassica oleracea
Bo2g134900
I
0.665
ONIVA06G30620
Oryza nivara
ONIVA06G30620
N
0.663
Si007179m.g
Setaria italica
Si007179m.g
N
0.663
PGSC0003DMG400028830
Solanum tuberosum
PGSC0003DMG400028830
I
0.663
ORUFI06G26110
Oryza rufipogon
ORUFI06G26110
N
0.663
ORGLA06G0204400
Oryza glaberrima
ORGLA06G0204400
N
0.663
Solyc12g006280.1
Solanum lycopersicum
Solyc12g006280.1
I
0.663
OPUNC06G22010
Oryza punctata
OPUNC06G22010
N
0.663
OBART06G24290
Oryza barthii
OBART06G24290
N
0.663
Pavir.Db00422
Panicum virgatum
Pavir.Db00422
N
0.663
LPERR06G20200
Leersia perrieri
LPERR06G20200
N
0.663
GRMZM2G454449
Zea mays
GRMZM2G454449
N
0.663
Pavir.Da00200
Panicum virgatum
Pavir.Da00200
N
0.663
OB06G32040
Oryza brachyantha
OB06G32040
N
0.663
OMERI06G24530
Oryza meridionalis
OMERI06G24530
N
0.663
OGLUM06G25550
Oryza glumaepatula
OGLUM06G25550
N
0.663
OLONG_026929
Oryza longistaminata
OLONG_026929
N
0.663
Sb10g026930
Sorghum bicolor
Sb10g026930
N
0.663
Pavir.Ib00180
Panicum virgatum
Pavir.Ib00180
I
0.662
Thhalv10017090m.g
Eutrema salsugineum
Thhalv10017090m.g
I
0.662
Pavir.Ia04483
Panicum virgatum
Pavir.Ia04483
I
0.662
Ca_00645
Cicer arietinum
Ca_00645
I
0.662
Lus10001149.g
Linum usitatissimum
Lus10001149.g
I
0.662
Si036127m.g
Setaria italica
Si036127m.g
I
0.662
OPUNC03G02160
Oryza punctata
OPUNC03G02160
I
0.662
LPERR10G13190
Leersia perrieri
LPERR10G13190
I
0.662
LPERR03G02180
Leersia perrieri
LPERR03G02180
I
0.662
OB03G12320
Oryza brachyantha
OB03G12320
I
0.662
OB10G24340
Oryza brachyantha
OB10G24340
I
0.662
OBART03G02370
Oryza barthii
OBART03G02370
I
0.662
GRMZM5G887276
Zea mays
GRMZM5G887276
I
0.662
GRMZM2G374986
Zea mays
GRMZM2G374986
I
0.662
BGIOSGA011527
Oryza indica
BGIOSGA011527
I
0.662
BGIOSGA031479
Oryza indica
BGIOSGA031479
I
0.662
GLYMA09G00685
Glycine max
GLYMA09G00685
I
0.662
GLYMA15G11576
Glycine max
GLYMA15G11576
I
0.662
OBART10G17270
Oryza barthii
OBART10G17270
I
0.662
OGLUM03G02310
Oryza glumaepatula
OGLUM03G02310
I
0.662
ORGLA03G0021400
Oryza glaberrima
ORGLA03G0021400
I
0.662
OPUNC10G15550
Oryza punctata
OPUNC10G15550
I
0.662
ORGLA10G0122800
Oryza glaberrima
ORGLA10G0122800
I
0.662
ORUFI03G02110
Oryza rufipogon
ORUFI03G02110
I
0.662
ORUFI10G18320
Oryza rufipogon
ORUFI10G18320
I
0.662
ONIVA10G19340
Oryza nivara
ONIVA10G19340
I
0.662
ONIVA03G01980
Oryza nivara
ONIVA03G01980
I
0.662
OLONG_004539
Oryza longistaminata
OLONG_004539
I
0.662
OLONG_011732
Oryza longistaminata
OLONG_011732
I
0.662
OMERI03G02220
Oryza meridionalis
OMERI03G02220
I
0.662
OMERI10G13750
Oryza meridionalis
OMERI10G13750
I
0.662
Sb01g048420
Sorghum bicolor
Sb01g048420
I
0.662