Cucsa.058770 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.058770 T284366_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK05732.1
M01276_2.00
Cannabis sativa
HNATTCBNN

NNVGAATND
PBM
Lambert et al.(2019)
pTH11367
0.706 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.058770.1 Myb 21 72

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cla023595 Citrullus lanatus Cla023595 N 0.856
SapurV1A.1979s0020 Salix purpurea SapurV1A.1979s0020 N 0.742
SapurV1A.0076s0110 Salix purpurea SapurV1A.0076s0110 N 0.742
Cagra.0549s0004 Capsella grandiflora Cagra.0549s0004 I 0.732
fgenesh2_kg.5__121__AT2G02060.1 Arabidopsis lyrata fgenesh2_kg.5__121__AT2G02060.1 I 0.732
Bostr.0556s0031 Boechera stricta Bostr.0556s0031 I 0.732
Carubv10017538m.g Capsella rubella Carubv10017538m.g I 0.732
AT2G02060 Arabidopsis thaliana AT2G02060 I 0.732
GLYMA18G14071 Glycine max GLYMA18G14071 I 0.731
GLYMA08G41735 Glycine max GLYMA08G41735 I 0.723
PK05732.1 Cannabis sativa PK05732.1 D 0.706
VIT_00s1624g00010 Vitis vinifera VIT_00s1624g00010 I 0.683
TCM_001942 Theobroma cacao TCM_001942 I 0.683
Traes_1BL_E2629CBC1 Triticum aestivum Traes_1BL_E2629CBC1 I 0.680
Si039234m.g Setaria italica Si039234m.g I 0.680
Pavir.J33581 Panicum virgatum Pavir.J33581 I 0.680
mgf023762m Mimulus guttatus mgf023762m I 0.677
Thhalv10004791m.g Eutrema salsugineum Thhalv10004791m.g I 0.672
Bra026618 Brassica rapa Bra026618 I 0.672
POPTR_0002s05770 Populus trichocarpa POPTR_0002s05770 I 0.671
MTR_3g450310 Medicago truncatula MTR_3g450310 N 0.670
Bo7g080160 Brassica oleracea Bo7g080160 I 0.666
Bra024836 Brassica rapa Bra024836 I 0.666
Bo2g134900 Brassica oleracea Bo2g134900 I 0.665
ONIVA06G30620 Oryza nivara ONIVA06G30620 N 0.663
Si007179m.g Setaria italica Si007179m.g N 0.663
PGSC0003DMG400028830 Solanum tuberosum PGSC0003DMG400028830 I 0.663
ORUFI06G26110 Oryza rufipogon ORUFI06G26110 N 0.663
ORGLA06G0204400 Oryza glaberrima ORGLA06G0204400 N 0.663
Solyc12g006280.1 Solanum lycopersicum Solyc12g006280.1 I 0.663
OPUNC06G22010 Oryza punctata OPUNC06G22010 N 0.663
OBART06G24290 Oryza barthii OBART06G24290 N 0.663
Pavir.Db00422 Panicum virgatum Pavir.Db00422 N 0.663
LPERR06G20200 Leersia perrieri LPERR06G20200 N 0.663
GRMZM2G454449 Zea mays GRMZM2G454449 N 0.663
Pavir.Da00200 Panicum virgatum Pavir.Da00200 N 0.663
OB06G32040 Oryza brachyantha OB06G32040 N 0.663
OMERI06G24530 Oryza meridionalis OMERI06G24530 N 0.663
OGLUM06G25550 Oryza glumaepatula OGLUM06G25550 N 0.663
OLONG_026929 Oryza longistaminata OLONG_026929 N 0.663
Sb10g026930 Sorghum bicolor Sb10g026930 N 0.663
Pavir.Ib00180 Panicum virgatum Pavir.Ib00180 I 0.662
Thhalv10017090m.g Eutrema salsugineum Thhalv10017090m.g I 0.662
Pavir.Ia04483 Panicum virgatum Pavir.Ia04483 I 0.662
Ca_00645 Cicer arietinum Ca_00645 I 0.662
Lus10001149.g Linum usitatissimum Lus10001149.g I 0.662
Si036127m.g Setaria italica Si036127m.g I 0.662
OPUNC03G02160 Oryza punctata OPUNC03G02160 I 0.662
LPERR10G13190 Leersia perrieri LPERR10G13190 I 0.662
LPERR03G02180 Leersia perrieri LPERR03G02180 I 0.662
OB03G12320 Oryza brachyantha OB03G12320 I 0.662
OB10G24340 Oryza brachyantha OB10G24340 I 0.662
OBART03G02370 Oryza barthii OBART03G02370 I 0.662
GRMZM5G887276 Zea mays GRMZM5G887276 I 0.662
GRMZM2G374986 Zea mays GRMZM2G374986 I 0.662
BGIOSGA011527 Oryza indica BGIOSGA011527 I 0.662
BGIOSGA031479 Oryza indica BGIOSGA031479 I 0.662
GLYMA09G00685 Glycine max GLYMA09G00685 I 0.662
GLYMA15G11576 Glycine max GLYMA15G11576 I 0.662
OBART10G17270 Oryza barthii OBART10G17270 I 0.662
OGLUM03G02310 Oryza glumaepatula OGLUM03G02310 I 0.662
ORGLA03G0021400 Oryza glaberrima ORGLA03G0021400 I 0.662
OPUNC10G15550 Oryza punctata OPUNC10G15550 I 0.662
ORGLA10G0122800 Oryza glaberrima ORGLA10G0122800 I 0.662
ORUFI03G02110 Oryza rufipogon ORUFI03G02110 I 0.662
ORUFI10G18320 Oryza rufipogon ORUFI10G18320 I 0.662
ONIVA10G19340 Oryza nivara ONIVA10G19340 I 0.662
ONIVA03G01980 Oryza nivara ONIVA03G01980 I 0.662
OLONG_004539 Oryza longistaminata OLONG_004539 I 0.662
OLONG_011732 Oryza longistaminata OLONG_011732 I 0.662
OMERI03G02220 Oryza meridionalis OMERI03G02220 I 0.662
OMERI10G13750 Oryza meridionalis OMERI10G13750 I 0.662
Sb01g048420 Sorghum bicolor Sb01g048420 I 0.662