Cucsa.117700 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.117700 T284413_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT5G05090
M02305_2.00
Arabidopsis thaliana
NHAGATHCKNN

NNMGDATCTDN
PBM
Weirauch et al.(2014)
pTH7104
0.827 0.957
ARR14
M00873_2.00
Arabidopsis thaliana
NNAGATHCKS

SMGDATCTNN
PBM
Franco-Zorrilla et al.(2014)
ARR14
0.662 0.660
ARR14
M02293_2.00
Arabidopsis thaliana
NAGATHYBNN

NNVRDATCTN
PBM
Weirauch et al.(2014)
pTH7531
0.662 0.660
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.117700.1 Myb 159 209

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

304 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMXG00000001476 Astyanax mexicanus ENSAMXG00000001476 N 0.000
ENSAMXG00000008709 Astyanax mexicanus ENSAMXG00000008709 N 0.000
ENSPFOG00000004031 Poecilia formosa ENSPFOG00000004031 N 0.000
ENSPFOG00000008075 Poecilia formosa ENSPFOG00000008075 N 0.000
ENSXMAG00000002499 Xiphophorus maculatus ENSXMAG00000002499 N 0.000
ENSXMAG00000016200 Xiphophorus maculatus ENSXMAG00000016200 N 0.000
HES6 Anolis carolinensis ENSACAG00000028166 N 0.000
hes6 Danio rerio ENSDARG00000019335 N 0.000
Pvit_13984 Pogona vitticeps Pvit_13984 N 0.000
XP_002933393 Xenopus tropicalis XP_002933393 N 0.000