Cucsa.146980 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.146980 T284436_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.146980.1 Myb 134 180
Cucsa.146980.1 Myb 186 231

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla008304 Citrullus lanatus Cla008304 N 0.885
chr4.CM0042.120.nd Lotus japonicus chr4.CM0042.120.nd N 0.828
29681.m001315 Ricinus communis 29681.m001315 N 0.826
cassava26674.m1 Manihot esculenta cassava26674.m1 N 0.826
GLYMA18G07360 Glycine max GLYMA18G07360 N 0.823
POPTR_0001s25710 Populus trichocarpa POPTR_0001s25710 N 0.822
MTR_3g463400 Medicago truncatula MTR_3g463400 N 0.816
POPTR_0009s04870 Populus trichocarpa POPTR_0009s04870 N 0.803
PRUPE_ppa018123mg Prunus persica PRUPE_ppa018123mg I 0.800
Pm000541 Prunus mume Pm000541 I 0.800
Ciclev10030254m.g Citrus clementina Ciclev10030254m.g N 0.800
orange1.1g046581m.g Citrus sinensis orange1.1g046581m.g N 0.800
MDP0000319656 Malus domestica MDP0000319656 I 0.800
Gorai.001G115300 Gossypium raimondii Gorai.001G115300 N 0.797
cassava26507.m1 Manihot esculenta cassava26507.m1 N 0.797
Gorai.011G044100 Gossypium raimondii Gorai.011G044100 N 0.797
GLYMA02G39070 Glycine max GLYMA02G39070 N 0.795
MTR_5g070020 Medicago truncatula MTR_5g070020 N 0.795
SapurV1A.0772s0150 Salix purpurea SapurV1A.0772s0150 N 0.792
GLYMA14G37140 Glycine max GLYMA14G37140 N 0.785
TCM_041651 Theobroma cacao TCM_041651 N 0.775
SapurV1A.0041s0840 Salix purpurea SapurV1A.0041s0840 N 0.768
Bostr.20821s0001 Boechera stricta Bostr.20821s0001 N 0.766
Thhalv10015404m.g Eutrema salsugineum Thhalv10015404m.g N 0.766
Thhalv10027294m.g Eutrema salsugineum Thhalv10027294m.g N 0.766
Solyc06g076840.1 Solanum lycopersicum Solyc06g076840.1 N 0.761
PGSC0003DMG400044141 Solanum tuberosum PGSC0003DMG400044141 N 0.761
gene08006-v1.0-hybrid Fragaria vesca gene08006-v1.0-hybrid I 0.755
evm.TU.supercontig_112.44 Carica papaya evm.TU.supercontig_112.44 N 0.755
Lus10018220.g Linum usitatissimum Lus10018220.g N 0.753
Lus10040684.g Linum usitatissimum Lus10040684.g N 0.749
Bo3g018490 Brassica oleracea Bo3g018490 I 0.741
Bra006744 Brassica rapa Bra006744 I 0.741
MYB64 Arabidopsis thaliana AT5G11050 N 0.737
Bo2g028290 Brassica oleracea Bo2g028290 I 0.737
Carubv10003695m.g Capsella rubella Carubv10003695m.g N 0.733
Cagra.1398s0045 Capsella grandiflora Cagra.1398s0045 N 0.733
Carubv10028458m.g Capsella rubella Carubv10028458m.g I 0.732
fgenesh2_kg.3__2684__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.3__2684__AT5G58850.1 I 0.732
Bra020346 Brassica rapa Bra020346 I 0.732
Cagra.0891s0081 Capsella grandiflora Cagra.0891s0081 I 0.732
fgenesh2_kg.277__1__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.277__1__AT5G58850.1 I 0.732
MYB64 Arabidopsis lyrata fgenesh2_kg.6__1071__AT5G11050.1 N 0.728
Thhalv10016057m.g Eutrema salsugineum Thhalv10016057m.g I 0.722
cassava9008.m1 Manihot esculenta cassava9008.m1 I 0.719
Aquca_045_00020 Aquilegia coerulea Aquca_045_00020 I 0.711
cassava19706.m1 Manihot esculenta cassava19706.m1 I 0.707
Bostr.23997s0007 Boechera stricta Bostr.23997s0007 N 0.705
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I 0.704
GLYMA05G02300 Glycine max GLYMA05G02300 I 0.704
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I 0.704
Pm024743 Prunus mume Pm024743 I 0.704
MYB98 Vitis vinifera VIT_17s0000g08550 I 0.704
POPTR_0012s08360 Populus trichocarpa POPTR_0012s08360 I 0.703
PDK_20s1782461g001 Phoenix dactylifera PDK_20s1782461g001 N 0.696
AMTR_s00096p00076220 Amborella trichopoda AMTR_s00096p00076220 I 0.693
Lus10005864.g Linum usitatissimum Lus10005864.g I 0.691
GSMUA_Achr10G00770_001 Musa acuminata GSMUA_Achr10G00770_001 N 0.689
Cla019490 Citrullus lanatus Cla019490 I 0.688
Cucsa.196850 Cucumis sativus Cucsa.196850 I 0.688
LjSGA_147332.1 Lotus japonicus LjSGA_147332.1 N 0.685
GSMUA_Achr6G33700_001 Musa acuminata GSMUA_Achr6G33700_001 N 0.685
Solyc06g071520.1 Solanum lycopersicum Solyc06g071520.1 I 0.683
Eucgr.J01929 Eucalyptus grandis Eucgr.J01929 N 0.681
Traes_7BS_D28CCE3B8 Triticum aestivum Traes_7BS_D28CCE3B8 I 0.680
ORGLA06G0038500 Oryza glaberrima ORGLA06G0038500 I 0.680
ORUFI06G04170 Oryza rufipogon ORUFI06G04170 I 0.680
OS06G0162700 Oryza sativa OS06G0162700 I 0.680
OLONG_010000 Oryza longistaminata OLONG_010000 I 0.680
OPUNC06G03990 Oryza punctata OPUNC06G03990 I 0.680
OMERI06G04840 Oryza meridionalis OMERI06G04840 I 0.680
ONIVA06G05390 Oryza nivara ONIVA06G05390 I 0.680
OGLUM06G04280 Oryza glumaepatula OGLUM06G04280 I 0.680
OBART06G04170 Oryza barthii OBART06G04170 I 0.680
Traes_7AS_A337F362A Triticum aestivum Traes_7AS_A337F362A I 0.680
TRIUR3_12421 Triticum urartu TRIUR3_12421 I 0.680
BGIOSGA022369 Oryza indica BGIOSGA022369 I 0.680
F775_22212 Aegilops tauschii F775_22212 I 0.680
OB06G13860 Oryza brachyantha OB06G13860 I 0.680
LPERR06G03780 Leersia perrieri LPERR06G03780 I 0.680
SapurV1A.0571s0110 Salix purpurea SapurV1A.0571s0110 I 0.679
MDP0000215359 Malus domestica MDP0000215359 I 0.679
TCM_012087 Theobroma cacao TCM_012087 I 0.679
Gorai.008G295800 Gossypium raimondii Gorai.008G295800 I 0.679
POPTR_0015s08880 Populus trichocarpa POPTR_0015s08880 I 0.670
SapurV1A.2163s0040 Salix purpurea SapurV1A.2163s0040 I 0.670
mgf024290m Mimulus guttatus mgf024290m I 0.669
evm.TU.supercontig_76.38 Carica papaya evm.TU.supercontig_76.38 I 0.669
Traes_1BL_4D9406708 Triticum aestivum Traes_1BL_4D9406708 I 0.668
Traes_1DL_918A8F357 Triticum aestivum Traes_1DL_918A8F357 I 0.667