CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.160570
(
Cucumis sativus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cucsa.160570
T284446_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.160570.1
Myb
199
244
RKPWSEAEDLELMAAVKKCGEGNWANIIRGDFLSDRTASQLSQRWA
Links
Other
Myb/SANT
family TFs
Other
Cucumis sativus
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla022491
Citrullus lanatus
Cla022491
N
0.891
Eucgr.F02154
Eucalyptus grandis
Eucgr.F02154
N
0.844
PK00855.1
Cannabis sativa
PK00855.1
N
0.836
29908.m006268
Ricinus communis
29908.m006268
N
0.818
Solyc12g087970.1
Solanum lycopersicum
Solyc12g087970.1
N
0.818
evm.TU.supercontig_21.26
Carica papaya
evm.TU.supercontig_21.26
N
0.818
SapurV1A.0004s1050
Salix purpurea
SapurV1A.0004s1050
N
0.800
cassava31065.valid.m1
Manihot esculenta
cassava31065.valid.m1
N
0.800
cassava4465.m1
Manihot esculenta
cassava4465.m1
N
0.800
POPTR_0002s10670
Populus trichocarpa
POPTR_0002s10670
N
0.800
SapurV1A.0320s0130
Salix purpurea
SapurV1A.0320s0130
N
0.767
VIT_18s0001g07620
Vitis vinifera
VIT_18s0001g07620
N
0.758
PRUPE_ppa1027142mg
Prunus persica
PRUPE_ppa1027142mg
N
0.754
Pm004407
Prunus mume
Pm004407
N
0.754
AMTR_s00016p00255950
Amborella trichopoda
AMTR_s00016p00255950
N
0.743
Cucsa.311960
Cucumis sativus
Cucsa.311960
N
0.726
Cucsa.311970
Cucumis sativus
Cucsa.311970
N
0.726
Cucsa.311950
Cucumis sativus
Cucsa.311950
N
0.726
Cucsa.311940
Cucumis sativus
Cucsa.311940
N
0.726
Cucsa.311930
Cucumis sativus
Cucsa.311930
N
0.726
Cla023409
Citrullus lanatus
Cla023409
N
0.725
GSMUA_Achr6G12970_001
Musa acuminata
GSMUA_Achr6G12970_001
N
0.711
orange1.1g007452m.g
Citrus sinensis
orange1.1g007452m.g
N
0.708
Ciclev10000622m.g
Citrus clementina
Ciclev10000622m.g
N
0.708
Aquca_007_00504
Aquilegia coerulea
Aquca_007_00504
N
0.707
Solyc04g076360.2
Solanum lycopersicum
Solyc04g076360.2
N
0.699
PGSC0003DMG400009342
Solanum tuberosum
PGSC0003DMG400009342
N
0.699
gene12179-v1.0-hybrid
Fragaria vesca
gene12179-v1.0-hybrid
N
0.668