Cucsa.251000 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.251000 T284476_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.251000.1 Myb 189 239

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla006313 Citrullus lanatus Cla006313 N 0.909
30147.m014309 Ricinus communis 30147.m014309 N 0.803
Ciclev10006586m.g Citrus clementina Ciclev10006586m.g N 0.803
orange1.1g040406m.g Citrus sinensis orange1.1g040406m.g N 0.803
cassava35050.m1 Manihot esculenta cassava35050.m1 N 0.781
orange1.1g043479m.g Citrus sinensis orange1.1g043479m.g N 0.768
Ciclev10006834m.g Citrus clementina Ciclev10006834m.g N 0.768
VIT_16s0100g00430 Vitis vinifera VIT_16s0100g00430 N 0.760
gene13325-v1.0-hybrid Fragaria vesca gene13325-v1.0-hybrid N 0.754
PRUPE_ppa023185mg Prunus persica PRUPE_ppa023185mg N 0.754
mgf019327m Mimulus guttatus mgf019327m N 0.750
evm.TU.supercontig_107.3 Carica papaya evm.TU.supercontig_107.3 N 0.745
cassava21270.m1 Manihot esculenta cassava21270.m1 N 0.745
POPTR_0015s13860 Populus trichocarpa POPTR_0015s13860 I 0.743
mgf018042m Mimulus guttatus mgf018042m N 0.736
MDP0000228719 Malus domestica MDP0000228719 N 0.732
GLYMA16G32311 Glycine max GLYMA16G32311 I 0.731
MTR_0450s0040 Medicago truncatula MTR_0450s0040 I 0.727
GLYMA09G27151 Glycine max GLYMA09G27151 N 0.721
gene03235-v1.0-hybrid Fragaria vesca gene03235-v1.0-hybrid N 0.721
Gorai.008G280500 Gossypium raimondii Gorai.008G280500 I 0.714
TCM_015085 Theobroma cacao TCM_015085 I 0.714
SapurV1A.0400s0190 Salix purpurea SapurV1A.0400s0190 N 0.714
Cla007104 Citrullus lanatus Cla007104 N 0.711
VIT_16s0100g00420 Vitis vinifera VIT_16s0100g00420 I 0.711
Carubv10007858m.g Capsella rubella Carubv10007858m.g N 0.710
Cagra.6496s0001 Capsella grandiflora Cagra.6496s0001 N 0.710
POPTR_0012s13900 Populus trichocarpa POPTR_0012s13900 N 0.701
Bra009284 Brassica rapa Bra009284 N 0.690
Thhalv10016040m.g Eutrema salsugineum Thhalv10016040m.g N 0.690
Bo9g175250 Brassica oleracea Bo9g175250 N 0.690
Ca_20899 Cicer arietinum Ca_20899 I 0.690
Carubv10003421m.g Capsella rubella Carubv10003421m.g N 0.682
ARR21 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000557 N 0.682
Bostr.13129s0247 Boechera stricta Bostr.13129s0247 N 0.682
orange1.1g009670m.g Citrus sinensis orange1.1g009670m.g I 0.679
IGS.gm_5_00099 Chlorella NC64A IGS.gm_5_00099 N 0.669
TRIUR3_30130 Triticum urartu TRIUR3_30130 I 0.668
Carubv10006317m.g Capsella rubella Carubv10006317m.g N 0.662