CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.313480
(
Cucumis sativus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cucsa.313480
T284518_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
APRR2
M02300_2.00
Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN
PBM
Weirauch et al.(2014)
pTH7102
0.714
0.851
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.313480.1
Myb
287
337
KVDWTPELHRNFVQAVEQLGIDHAIPSKILELMKVEGLTRHNIASHLQKYR
Cucsa.313480.2
Myb
280
330
KVDWTPELHRNFVQAVEQLGIDHAIPSKILELMKVEGLTRHNIASHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Cucumis sativus
TFs
99 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy