Cucsa.321580 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.321580 T284523_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
APRR2
M02300_2.00
Arabidopsis thaliana
NNRNWATCNN

NNGATWNYNN
PBM
Weirauch et al.(2014)
pTH7102
0.811 0.891
GPRI1
M00874_2.00
Arabidopsis thaliana
NNDATHN

NDATHNN
PBM
Franco-Zorrilla et al.(2014)
GLK1
0.698 0.872
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.321580.1 Myb 316 365
Cucsa.321580.2 Myb 316 366
Cucsa.321580.3 Myb 316 366
Cucsa.321580.4 Myb 316 366
Cucsa.321580.5 Myb 316 366
Cucsa.321580.6 Myb 316 366
Cucsa.321580.7 Myb 316 366
Cucsa.321580.8 Myb 316 366

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cla008926 Citrullus lanatus Cla008926 I 0.909
Pm014733 Prunus mume Pm014733 I 0.876
Ciclev10031120m.g Citrus clementina Ciclev10031120m.g I 0.876
PRUPE_ppa004161mg Prunus persica PRUPE_ppa004161mg I 0.876
PK19826.1 Cannabis sativa PK19826.1 I 0.876
orange1.1g008254m.g Citrus sinensis orange1.1g008254m.g I 0.876
APRR2 Vitis vinifera VIT_02s0012g00570 I 0.876
gene10484-v1.0-hybrid Fragaria vesca gene10484-v1.0-hybrid I 0.876
Eucgr.E00308 Eucalyptus grandis Eucgr.E00308 I 0.868
MDP0000237396 Malus domestica MDP0000237396 I 0.861
Lus10011044.g Linum usitatissimum Lus10011044.g I 0.859
APRR2 Arabidopsis lyrata fgenesh2_kg.7__2503__AT4G18020.2 I 0.857
APRR2 Arabidopsis thaliana AT4G18020 D 0.857
Lus10003013.g Linum usitatissimum Lus10003013.g I 0.851
30054.m000786 Ricinus communis 30054.m000786 I 0.851
PDK_20s1585631g001 Phoenix dactylifera PDK_20s1585631g001 I 0.845
Lus10040109.g Linum usitatissimum Lus10040109.g I 0.839
Bo1g019180 Brassica oleracea Bo1g019180 I 0.834
Bostr.30275s0270 Boechera stricta Bostr.30275s0270 I 0.834
Thhalv10024919m.g Eutrema salsugineum Thhalv10024919m.g I 0.834
Bo7g105690 Brassica oleracea Bo7g105690 I 0.834
Bra013279 Brassica rapa Bra013279 I 0.834
Bra013278 Brassica rapa Bra013278 I 0.834
Bra013277 Brassica rapa Bra013277 I 0.834
Bra012623 Brassica rapa Bra012623 I 0.834
TCM_015780 Theobroma cacao TCM_015780 I 0.827
cassava2466.valid.m1 Manihot esculenta cassava2466.valid.m1 I 0.823
Aquca_044_00072 Aquilegia coerulea Aquca_044_00072 I 0.819
evm.TU.supercontig_6.428 Carica papaya evm.TU.supercontig_6.428 I 0.816
POPTR_0001s02910 Populus trichocarpa POPTR_0001s02910 I 0.816
MDP0000248863 Malus domestica MDP0000248863 I 0.812
SapurV1A.1296s0050 Salix purpurea SapurV1A.1296s0050 I 0.804
SapurV1A.0132s0010 Salix purpurea SapurV1A.0132s0010 I 0.798
SELMODRAFT_428906 Selaginella moellendorffii SELMODRAFT_428906 I 0.786
Ca_02285 Cicer arietinum Ca_02285 I 0.786
Gorai.008G228800 Gossypium raimondii Gorai.008G228800 I 0.786
chr4.CM0831.100.nd Lotus japonicus chr4.CM0831.100.nd I 0.778
Ca_12825 Cicer arietinum Ca_12825 I 0.778
PGSC0003DMG400024217 Solanum tuberosum PGSC0003DMG400024217 I 0.778
Solyc08g077230.2 Solanum lycopersicum Solyc08g077230.2 I 0.778
GLYMA17G16360 Glycine max GLYMA17G16360 I 0.775
MTR_4g098870 Medicago truncatula MTR_4g098870 I 0.771
Carubv10004540m.g Capsella rubella Carubv10004540m.g I 0.768
GLYMA01G40900 Glycine max GLYMA01G40900 I 0.768
Cagra.1595s0002 Capsella grandiflora Cagra.1595s0002 I 0.768
chr2.CM0021.770.nc Lotus japonicus chr2.CM0021.770.nc I 0.768
GLYMA11G04441 Glycine max GLYMA11G04441 I 0.768
POPTR_0003s08600 Populus trichocarpa POPTR_0003s08600 I 0.762
cassava42048.valid.m1 Manihot esculenta cassava42048.valid.m1 I 0.760
cassava42047.valid.m1 Manihot esculenta cassava42047.valid.m1 I 0.760
AMTR_s00149p00035260 Amborella trichopoda AMTR_s00149p00035260 I 0.756
GSMUA_Achr11G17740_001 Musa acuminata GSMUA_Achr11G17740_001 I 0.756
Gorai.004G188300 Gossypium raimondii Gorai.004G188300 I 0.752
MTR_5g014040 Medicago truncatula MTR_5g014040 I 0.752
Gorai.003G180100 Gossypium raimondii Gorai.003G180100 I 0.747
GLYMA05G06070 Glycine max GLYMA05G06070 I 0.738
Lus10030938.g Linum usitatissimum Lus10030938.g I 0.737
Cucsa.313480 Cucumis sativus Cucsa.313480 I 0.735
Cla016403 Citrullus lanatus Cla016403 I 0.731
Thhalv10003223m.g Eutrema salsugineum Thhalv10003223m.g I 0.729
Carubv10026528m.g Capsella rubella Carubv10026528m.g I 0.729
fgenesh2_kg.8__391__AT5G44190.1 Arabidopsis lyrata fgenesh2_kg.8__391__AT5G44190.1 I 0.729
GLK2 Arabidopsis thaliana AT5G44190 I 0.729
Bostr.3148s0040 Boechera stricta Bostr.3148s0040 I 0.729
Cagra.0381s0008 Capsella grandiflora Cagra.0381s0008 I 0.729
Eucgr.K01056 Eucalyptus grandis Eucgr.K01056 I 0.725
Ca_24009 Cicer arietinum Ca_24009 I 0.719
GSMUA_Achr2G18200_001 Musa acuminata GSMUA_Achr2G18200_001 I 0.703
Solyc06g061030.2 Solanum lycopersicum Solyc06g061030.2 I 0.699
PGSC0003DMG400026587 Solanum tuberosum PGSC0003DMG400026587 I 0.699
GPRI1 Arabidopsis lyrata fgenesh2_kg.3__3588__AT2G20570.1 I 0.698
Cla003791 Citrullus lanatus Cla003791 I 0.698
Lus10018649.g Linum usitatissimum Lus10018649.g I 0.698
Lus10033642.g Linum usitatissimum Lus10033642.g I 0.698
GPRI1 Arabidopsis thaliana AT2G20570 D 0.698
Bostr.7903s0106 Boechera stricta Bostr.7903s0106 I 0.698
Cagra.2516s0014 Capsella grandiflora Cagra.2516s0014 I 0.698
Cucsa.087530 Cucumis sativus Cucsa.087530 I 0.698
Carubv10014114m.g Capsella rubella Carubv10014114m.g I 0.698
Lus10039883.g Linum usitatissimum Lus10039883.g I 0.698
MDP0000225179 Malus domestica MDP0000225179 I 0.678
SapurV1A.0693s0070 Salix purpurea SapurV1A.0693s0070 I 0.678
SapurV1A.0118s0260 Salix purpurea SapurV1A.0118s0260 I 0.678
SapurV1A.1950s0030 Salix purpurea SapurV1A.1950s0030 I 0.678
orange1.1g013528m.g Citrus sinensis orange1.1g013528m.g I 0.678
MDP0000526864 Malus domestica MDP0000526864 I 0.678
PK27491.1 Cannabis sativa PK27491.1 I 0.678
cassava9823.m1 Manihot esculenta cassava9823.m1 I 0.678
Pm014123 Prunus mume Pm014123 I 0.678
29983.m003131 Ricinus communis 29983.m003131 I 0.678
TCM_008193 Theobroma cacao TCM_008193 I 0.678
PRUPE_ppa014599mg Prunus persica PRUPE_ppa014599mg I 0.678
POPTR_0007s01230 Populus trichocarpa POPTR_0007s01230 I 0.678
POPTR_0017s04720 Populus trichocarpa POPTR_0017s04720 I 0.678
Gorai.012G126600 Gossypium raimondii Gorai.012G126600 I 0.678
cassava43649.valid.m1 Manihot esculenta cassava43649.valid.m1 I 0.678
Ciclev10015266m.g Citrus clementina Ciclev10015266m.g I 0.678
gene17750-v1.0-hybrid Fragaria vesca gene17750-v1.0-hybrid I 0.678
Gorai.002G020300 Gossypium raimondii Gorai.002G020300 I 0.678
cassava43650.valid.m1 Manihot esculenta cassava43650.valid.m1 I 0.678
fgenesh1_pm.scaffold_311000005 Physcomitrella patens fgenesh1_pm.scaffold_311000005 I 0.678
estExt_gwp_gw1.C_310256 Physcomitrella patens estExt_gwp_gw1.C_310256 I 0.678
AMTR_s00058p00133630 Amborella trichopoda AMTR_s00058p00133630 I 0.678
Bo7g067200 Brassica oleracea Bo7g067200 I 0.667
Bra033726 Brassica rapa Bra033726 I 0.667
Thhalv10001986m.g Eutrema salsugineum Thhalv10001986m.g I 0.664