CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.141.94.1
(
Physcomitrella patens
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
e_gw1.141.94.1
T284580_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.141.94.1
Myb
13
42
RLRWTPELHERFVDAVNQLGGADSKFLSYL
Links
Other
Myb/SANT
family TFs
Other
Physcomitrella patens
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla005572
Citrullus lanatus
Cla005572
N
0.846
OS08G0346400
Oryza sativa
OS08G0346400
I
0.827
GRMZM2G162409
Zea mays
GRMZM2G162409
I
0.819
OPUNC02G34240
Oryza punctata
OPUNC02G34240
N
0.809
OMERI02G34900
Oryza meridionalis
OMERI02G34900
N
0.809
F775_00616
Aegilops tauschii
F775_00616
N
0.770
Bra011042
Brassica rapa
Bra011042
N
0.770
MLOC_63597
Hordeum vulgare
MLOC_63597
I
0.750
Pavir.Ba02286
Panicum virgatum
Pavir.Ba02286
N
0.749
LjSGA_102149.2
Lotus japonicus
LjSGA_102149.2
N
0.749
PGSC0003DMG400007401
Solanum tuberosum
PGSC0003DMG400007401
I
0.749
evm.TU.supercontig_817.1
Carica papaya
evm.TU.supercontig_817.1
N
0.749
PRUPE_ppa007491m2g
Prunus persica
PRUPE_ppa007491m2g
N
0.749
scaffold_603773.1
Arabidopsis lyrata
scaffold_603773.1
N
0.742
Carubv10012777m.g
Capsella rubella
Carubv10012777m.g
N
0.735
orange1.1g038008m.g
Citrus sinensis
orange1.1g038008m.g
N
0.731
OPUNC08G10730
Oryza punctata
OPUNC08G10730
N
0.731
OGLUM08G12590
Oryza glumaepatula
OGLUM08G12590
I
0.731
BGIOSGA028509
Oryza indica
BGIOSGA028509
N
0.731
F775_22357
Aegilops tauschii
F775_22357
N
0.722
GSMUA_Achr6G20070_001
Musa acuminata
GSMUA_Achr6G20070_001
N
0.718
30005.m001245
Ricinus communis
30005.m001245
N
0.717
Pavir.Fa01260
Panicum virgatum
Pavir.Fa01260
N
0.695
Bra034737
Brassica rapa
Bra034737
N
0.689
OLONG_004751
Oryza longistaminata
OLONG_004751
N
0.671
PGSC0003DMG400009304
Solanum tuberosum
PGSC0003DMG400009304
I
0.671
PRUPE_ppa025217mg
Prunus persica
PRUPE_ppa025217mg
N
0.669
OLONG_004372
Oryza longistaminata
OLONG_004372
N
0.663