estExt_gwp_gw1.C_780109 (Physcomitrella patens)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 estExt_gwp_gw1.C_780109 T284830_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_gwp_gw1.C_780109 Myb 14 61
estExt_gwp_gw1.C_780109 Myb 67 112

Links

Other Myb/SANT family TFs
Other Physcomitrella patens TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh1_pg.scaffold_420000003 Physcomitrella patens fgenesh1_pg.scaffold_420000003 I 0.830
gw1.433.32.1 Physcomitrella patens gw1.433.32.1 I 0.728
Cucsa.156340 Cucumis sativus Cucsa.156340 I 0.703
Cla004104 Citrullus lanatus Cla004104 I 0.703
SapurV1A.0442s0250 Salix purpurea SapurV1A.0442s0250 I 0.696
POPTR_0013s00290 Populus trichocarpa POPTR_0013s00290 I 0.696
GSMUA_Achr5G05910_001 Musa acuminata GSMUA_Achr5G05910_001 I 0.687
AMTR_s00049p00074250 Amborella trichopoda AMTR_s00049p00074250 I 0.685
Eucgr.J02279 Eucalyptus grandis Eucgr.J02279 I 0.685
Lus10032117.g Linum usitatissimum Lus10032117.g I 0.683
PRUPE_ppa026877mg Prunus persica PRUPE_ppa026877mg I 0.682
cassava17364.m1 Manihot esculenta cassava17364.m1 I 0.682
AtMYB40 Vitis vinifera VIT_14s0219g00050 I 0.682
Ciclev10017764m.g Citrus clementina Ciclev10017764m.g I 0.682
gene28021-v1.0-hybrid Fragaria vesca gene28021-v1.0-hybrid I 0.682
evm.TU.supercontig_1097.3 Carica papaya evm.TU.supercontig_1097.3 I 0.682
mgf018940m Mimulus guttatus mgf018940m I 0.682
Pm015564 Prunus mume Pm015564 I 0.682
MDP0000303239 Malus domestica MDP0000303239 I 0.678
Eucgr.B01827 Eucalyptus grandis Eucgr.B01827 I 0.678
MDP0000241111 Malus domestica MDP0000241111 I 0.678
Aquca_011_00323 Aquilegia coerulea Aquca_011_00323 I 0.677
Cla019513 Citrullus lanatus Cla019513 I 0.676
Eucgr.K02806 Eucalyptus grandis Eucgr.K02806 I 0.676
cassava3745.m1 Manihot esculenta cassava3745.m1 I 0.675
Eucgr.K00153 Eucalyptus grandis Eucgr.K00153 I 0.674
Gorai.001G268000 Gossypium raimondii Gorai.001G268000 I 0.673
Gorai.006G037500 Gossypium raimondii Gorai.006G037500 I 0.673
GLYMA16G06900 Glycine max GLYMA16G06900 I 0.673
GLYMA05G06410 Glycine max GLYMA05G06410 I 0.673
Ca_19393 Cicer arietinum Ca_19393 I 0.673
Eucgr.I01698 Eucalyptus grandis Eucgr.I01698 I 0.673
TCM_017051 Theobroma cacao TCM_017051 I 0.673
Bo5g009920 Brassica oleracea Bo5g009920 I 0.672
Carubv10003172m.g Capsella rubella Carubv10003172m.g I 0.671
Cagra.14303s0002 Capsella grandiflora Cagra.14303s0002 I 0.671
PK11717.1 Cannabis sativa PK11717.1 I 0.671
Solyc02g093740.2 Solanum lycopersicum Solyc02g093740.2 I 0.670
PGSC0003DMG400012648 Solanum tuberosum PGSC0003DMG400012648 I 0.670
GLYMA19G07830 Glycine max GLYMA19G07830 I 0.670
Solyc05g014290.2 Solanum lycopersicum Solyc05g014290.2 I 0.667
SapurV1A.0120s0010 Salix purpurea SapurV1A.0120s0010 I 0.667
GSMUA_Achr6G07260_001 Musa acuminata GSMUA_Achr6G07260_001 I 0.666
GSMUA_Achr9G08600_001 Musa acuminata GSMUA_Achr9G08600_001 I 0.666
POPTR_0001s36220 Populus trichocarpa POPTR_0001s36220 I 0.665
mgf025004m Mimulus guttatus mgf025004m I 0.664
Aquca_011_00322 Aquilegia coerulea Aquca_011_00322 I 0.664
SapurV1A.1253s0080 Salix purpurea SapurV1A.1253s0080 I 0.662
POPTR_0012s13240 Populus trichocarpa POPTR_0012s13240 I 0.662
GSMUA_Achr6G25420_001 Musa acuminata GSMUA_Achr6G25420_001 I 0.662
Ca_03589 Cicer arietinum Ca_03589 I 0.661
BRADI3G36370 Brachypodium distachyon BRADI3G36370 I 0.661
MTR_1g085040 Medicago truncatula MTR_1g085040 I 0.661