EuGene.1300010252 (Ostreococcus RCC809)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 EuGene.1300010252 T284857_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.764 0.723
OS01G0708000
M02326_2.00 		Oryza sativa
WRMCCTAVNN
NNBTAGGKYW		 PBM
Weirauch et al.(2014)
pTH8716 		0.735 0.745
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.676 0.638
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.676 0.638
estExt_fgenesh1_pg.C_Chr_13.00010057
M02366_2.00 		Ostreococcus tauri
NRMCCTANN
NNTAGGKYN		 PBM
Weirauch et al.(2014)
pTH9424 		0.668 0.745
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.667 0.681
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EuGene.1300010252 Myb 5 57

Links

Other Myb/SANT family TFs
Other Ostreococcus RCC809 TFs

134 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EuGene.0000030935 Micromonas pusilla EuGene.0000030935 I 0.814
AMTR_s00007p00193000 Amborella trichopoda AMTR_s00007p00193000 I 0.810
Bra039650 Brassica rapa Bra039650 I 0.770
Bo5g077530 Brassica oleracea Bo5g077530 I 0.770
gw1.176.27.1 Physcomitrella patens gw1.176.27.1 I 0.769
OSTLU_27049 Ostreococcus lucimarinus OSTLU_27049 I 0.769
gw1.1.287.1 Physcomitrella patens gw1.1.287.1 I 0.769
SELMODRAFT_49296 Selaginella moellendorffii SELMODRAFT_49296 I 0.768
SELMODRAFT_49297 Selaginella moellendorffii SELMODRAFT_49297 I 0.768
mgf009594m Mimulus guttatus mgf009594m I 0.764
Bra018818 Brassica rapa Bra018818 I 0.764
TRB1 Arabidopsis thaliana AT1G49950 D 0.764
Carubv10009836m.g Capsella rubella Carubv10009836m.g I 0.764
Bostr.26675s0174 Boechera stricta Bostr.26675s0174 I 0.764
Bo6g018740 Brassica oleracea Bo6g018740 I 0.764
Cagra.2826s0004 Capsella grandiflora Cagra.2826s0004 I 0.764
TRB1 Arabidopsis lyrata fgenesh2_kg.1__4077__AT1G49950.2 I 0.764
Thhalv10011686m.g Eutrema salsugineum Thhalv10011686m.g I 0.764
evm.TU.supercontig_25.81 Carica papaya evm.TU.supercontig_25.81 I 0.763
Solyc01g106940.2 Solanum lycopersicum Solyc01g106940.2 I 0.761
PGSC0003DMG401025742 Solanum tuberosum PGSC0003DMG401025742 I 0.753
GSMUA_Achr2G13040_001 Musa acuminata GSMUA_Achr2G13040_001 I 0.753
PGSC0003DMG400023131 Solanum tuberosum PGSC0003DMG400023131 I 0.742
Solyc11g044320.1 Solanum lycopersicum Solyc11g044320.1 I 0.742
OBART01G28260 Oryza barthii OBART01G28260 I 0.735
ORGLA01G0233700 Oryza glaberrima ORGLA01G0233700 I 0.735
OS01G0708000 Oryza sativa OS01G0708000 D 0.735
ORUFI01G31370 Oryza rufipogon ORUFI01G31370 I 0.735
OGLUM01G32190 Oryza glumaepatula OGLUM01G32190 I 0.735
OLONG_008666 Oryza longistaminata OLONG_008666 I 0.735
OPUNC01G28080 Oryza punctata OPUNC01G28080 I 0.735
ONIVA01G32190 Oryza nivara ONIVA01G32190 I 0.735
BGIOSGA004300 Oryza indica BGIOSGA004300 I 0.735
OMERI05G07460 Oryza meridionalis OMERI05G07460 I 0.735
OB01G37330 Oryza brachyantha OB01G37330 I 0.735
BRADI2G42240 Brachypodium distachyon BRADI2G42240 I 0.732
Pavir.J27218 Panicum virgatum Pavir.J27218 I 0.732
Pavir.Ea02064 Panicum virgatum Pavir.Ea02064 I 0.732
TRIUR3_08672 Triticum urartu TRIUR3_08672 I 0.732
Traes_3AL_CF481F6AC Triticum aestivum Traes_3AL_CF481F6AC I 0.732
Si002403m.g Setaria italica Si002403m.g I 0.732
Sb03g026470 Sorghum bicolor Sb03g026470 I 0.732
TRAES3BF118300070CFD_g Triticum aestivum TRAES3BF118300070CFD_g I 0.732
GRMZM2G136887 Zea mays GRMZM2G136887 I 0.732
GRMZM2G087817 Zea mays GRMZM2G087817 I 0.732
EuGene.0500010080 Micromonas sp RCC299 EuGene.0500010080 I 0.719
Bo5g023860 Brassica oleracea Bo5g023860 I 0.709
Bra025967 Brassica rapa Bra025967 I 0.709
Cucsa.341020 Cucumis sativus Cucsa.341020 I 0.706
TCM_029078 Theobroma cacao TCM_029078 I 0.706
Bra030992 Brassica rapa Bra030992 I 0.706
Cla012798 Citrullus lanatus Cla012798 I 0.706
GLYMA08G20270 Glycine max GLYMA08G20270 I 0.706
GLYMA07G00930 Glycine max GLYMA07G00930 I 0.706
29706.m001328 Ricinus communis 29706.m001328 I 0.706
cassava34930.m1 Manihot esculenta cassava34930.m1 I 0.706
evm.TU.supercontig_106.31 Carica papaya evm.TU.supercontig_106.31 I 0.706
Thhalv10008387m.g Eutrema salsugineum Thhalv10008387m.g I 0.698
Bra016598 Brassica rapa Bra016598 I 0.698
Bo8g104830 Brassica oleracea Bo8g104830 I 0.698
Bo8g067280 Brassica oleracea Bo8g067280 I 0.698
orange1.1g023740m.g Citrus sinensis orange1.1g023740m.g I 0.698
Bostr.7128s0363 Boechera stricta Bostr.7128s0363 I 0.698
Cagra.0824s0121 Capsella grandiflora Cagra.0824s0121 I 0.698
scaffold_101953.1 Arabidopsis lyrata scaffold_101953.1 I 0.698
Ciclev10026245m.g Citrus clementina Ciclev10026245m.g I 0.698
Carubv10009890m.g Capsella rubella Carubv10009890m.g I 0.698
AT1G17520 Arabidopsis thaliana AT1G17520 I 0.698
TRB3 Arabidopsis thaliana AT3G49850 I 0.695
GSMUA_Achr6G30000_001 Musa acuminata GSMUA_Achr6G30000_001 I 0.688
SELMODRAFT_426759 Selaginella moellendorffii SELMODRAFT_426759 I 0.687
SELMODRAFT_413266 Selaginella moellendorffii SELMODRAFT_413266 I 0.687
Gorai.009G143000 Gossypium raimondii Gorai.009G143000 I 0.684
GLYMA15G14320 Glycine max GLYMA15G14320 I 0.682
gene25445-v1.0-hybrid Fragaria vesca gene25445-v1.0-hybrid I 0.682
Bo6g116150 Brassica oleracea Bo6g116150 I 0.682
GLYMA09G03390 Glycine max GLYMA09G03390 I 0.682
GSMUA_Achr6G31260_001 Musa acuminata GSMUA_Achr6G31260_001 I 0.682
Bra016037 Brassica rapa Bra016037 I 0.682
Ca_08043 Cicer arietinum Ca_08043 I 0.682
MTR_2g031870 Medicago truncatula MTR_2g031870 I 0.682
PDK_20s1413011g001 Phoenix dactylifera PDK_20s1413011g001 I 0.681
SELMODRAFT_443975 Selaginella moellendorffii SELMODRAFT_443975 I 0.680
SELMODRAFT_49312 Selaginella moellendorffii SELMODRAFT_49312 I 0.680
AMTR_s00036p00166880 Amborella trichopoda AMTR_s00036p00166880 I 0.680
PGSC0003DMG402003328 Solanum tuberosum PGSC0003DMG402003328 I 0.678
Solyc02g064630.2 Solanum lycopersicum Solyc02g064630.2 I 0.678
AT1G72740 Arabidopsis thaliana AT1G72740 D 0.676
Carubv10020636m.g Capsella rubella Carubv10020636m.g I 0.676
fgenesh2_kg.2__1540__AT1G72740.1 Arabidopsis lyrata fgenesh2_kg.2__1540__AT1G72740.1 I 0.676
Bostr.10273s0077 Boechera stricta Bostr.10273s0077 I 0.676
Cagra.1013s0027 Capsella grandiflora Cagra.1013s0027 I 0.676
PDK_20s1467521g002 Phoenix dactylifera PDK_20s1467521g002 I 0.675
POPTR_0009s09020 Populus trichocarpa POPTR_0009s09020 I 0.675
Eucgr.I01053 Eucalyptus grandis Eucgr.I01053 I 0.675
Ciclev10028926m.g Citrus clementina Ciclev10028926m.g I 0.675
POPTR_0001s30000 Populus trichocarpa POPTR_0001s30000 I 0.675
Cucsa.298390 Cucumis sativus Cucsa.298390 I 0.675
Lus10014653.g Linum usitatissimum Lus10014653.g I 0.675
SapurV1A.0019s0460 Salix purpurea SapurV1A.0019s0460 I 0.675
Gorai.005G230800 Gossypium raimondii Gorai.005G230800 I 0.675
29812.m000204 Ricinus communis 29812.m000204 I 0.675
orange1.1g022048m.g Citrus sinensis orange1.1g022048m.g I 0.675
SapurV1A.0005s0260 Salix purpurea SapurV1A.0005s0260 I 0.675
TRB1 Vitis vinifera VIT_03s0091g01030 I 0.675
Lus10033775.g Linum usitatissimum Lus10033775.g I 0.675
PK19870.1 Cannabis sativa PK19870.1 I 0.675
Aquca_004_00181 Aquilegia coerulea Aquca_004_00181 I 0.675
TCM_007242 Theobroma cacao TCM_007242 I 0.675
Cla006547 Citrullus lanatus Cla006547 I 0.675
MTR_0095s0040 Medicago truncatula MTR_0095s0040 I 0.671
MTR_1g041765 Medicago truncatula MTR_1g041765 I 0.671
MTR_8g494240 Medicago truncatula MTR_8g494240 I 0.671
estExt_fgenesh1_pg.C_Chr_13.00010057 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_13.00010057 D 0.668
SapurV1A.1368s0050 Salix purpurea SapurV1A.1368s0050 I 0.667
MDP0000239354 Malus domestica MDP0000239354 I 0.667
PK06103.1 Cannabis sativa PK06103.1 D 0.667
SapurV1A.0235s0100 Salix purpurea SapurV1A.0235s0100 I 0.667
Pm002374 Prunus mume Pm002374 I 0.667
VIT_00s1311g00020 Vitis vinifera VIT_00s1311g00020 I 0.667
VIT_07s0151g00480 Vitis vinifera VIT_07s0151g00480 I 0.667
PRUPE_ppa009220mg Prunus persica PRUPE_ppa009220mg I 0.667
POPTR_0014s01010 Populus trichocarpa POPTR_0014s01010 I 0.667
POPTR_0007s14920 Populus trichocarpa POPTR_0007s14920 I 0.667
MDP0000234807 Malus domestica MDP0000234807 I 0.667
29661.m000926 Ricinus communis 29661.m000926 I 0.667
Lus10011546.g Linum usitatissimum Lus10011546.g I 0.667
cassava7508.valid.m1 Manihot esculenta cassava7508.valid.m1 I 0.667
Lus10019260.g Linum usitatissimum Lus10019260.g I 0.667
gene05764-v1.0-hybrid Fragaria vesca gene05764-v1.0-hybrid I 0.667
mgf007122m Mimulus guttatus mgf007122m I 0.664
Pm021139 Prunus mume Pm021139 I 0.664
cassava19326.valid.m1 Manihot esculenta cassava19326.valid.m1 I 0.664
PRUPE_ppa011492mg Prunus persica PRUPE_ppa011492mg I 0.664