CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_1_chr1_3_0000687
(
Nectria haematococca
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
fgenesh1_pg.sca_1_chr1_3_0000687
T284886_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01706
M02344_2.00
Neurospora crassa
NNNAWYNNNN
NNNNRWTNNN
PBM
Weirauch et al.(2014)
pTH9662
0.859
0.964
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_1_chr1_3_0000687
Myb
14
58
QSKWSPEEDALIIELRGSGMKWEDISKRLPGRSAISCRLHYQNYL
fgenesh1_pg.sca_1_chr1_3_0000687
Myb
61
100
RSEWDEERKNKLARLYERFKPEMWAKVAEEMAVPWRAAEA
Links
Other
Myb/SANT
family TFs
Other
Nectria haematococca
TFs
118 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy