CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.C_chr_2.1000495
(
Pichia stipitis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
fgenesh1_pm.C_chr_2.1000495
T284924_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CDC5L
M11049_2.00
Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC
Transfac
Matys et al.(2006)
V$CDC5_01
0.662
0.750
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.C_chr_2.1000495
Myb
8
54
GGVWTNVEDEILKAAVSKYGLNQWSRVASLLTKKLAKQAKARWNEWL
fgenesh1_pm.C_chr_2.1000495
Myb
60
104
KTEWTLEEDEKLLNLAKLLPNQWRTIAPIVGRTATHCVERYQKLL
Links
Other
Myb/SANT
family TFs
Other
Pichia stipitis
TFs
293 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy