fgenesh1_pm.chr_3_#_182 (Ostreococcus RCC809)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 fgenesh1_pm.chr_3_#_182 T284926_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_fgenesh1_pg.C_Chr_03.00010061
M02364_2.00 		Ostreococcus tauri
NWRMCCYNN
NNRGGKYWN		 PBM
Weirauch et al.(2014)
pTH9419 		0.909 1.000
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.chr_3_#_182 Myb 397 447

Links

Other Myb/SANT family TFs
Other Ostreococcus RCC809 TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AZW_PierreAnnot2.00051 Micromonas sp RCC299 AZW_PierreAnnot2.00051 I 0.909
estExt_fgenesh1_pg.C_Chr_03.00010061 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_03.00010061 D 0.909
OSTLU_30413 Ostreococcus lucimarinus OSTLU_30413 I 0.832
EuGene.0000020579 Micromonas pusilla EuGene.0000020579 I 0.782
Genemark1.2462_g Coccomyxa subellipsoidea C169 Genemark1.2462_g I 0.781
fgeneshCV_pg.C_scaffold_4000372 Chlorella vulgaris fgeneshCV_pg.C_scaffold_4000372 I 0.781
estExt_fgenesh1_pg.C_430108 Physcomitrella patens estExt_fgenesh1_pg.C_430108 I 0.722
SELMODRAFT_406795 Selaginella moellendorffii SELMODRAFT_406795 I 0.722
SELMODRAFT_432103 Selaginella moellendorffii SELMODRAFT_432103 I 0.722
estExt_fgenesh1_pg.C_1650042 Physcomitrella patens estExt_fgenesh1_pg.C_1650042 I 0.722