gw1.12.313.1 (Ostreococcus RCC809)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gw1.12.313.1 T285052_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
1200010282
M02362_2.00 		Ostreococcus tauri
NVATATTCMNNN
NNNKGAATATBN		 PBM
Weirauch et al.(2014)
pTH9450 		0.867 0.872
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.12.313.1 Myb 26 77

Links

Other Myb/SANT family TFs
Other Ostreococcus RCC809 TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1200010282 Ostreococcus tauri 1200010282 D 0.867
OSTLU_26932 Ostreococcus lucimarinus OSTLU_26932 I 0.797
SELMODRAFT_438638 Selaginella moellendorffii SELMODRAFT_438638 I 0.677
SELMODRAFT_447259 Selaginella moellendorffii SELMODRAFT_447259 I 0.677
MDP0000269857 Malus domestica MDP0000269857 I 0.674
SELMODRAFT_155847 Selaginella moellendorffii SELMODRAFT_155847 I 0.669
GSMUA_Achr9G01710_001 Musa acuminata GSMUA_Achr9G01710_001 I 0.669
fgenesh1_pg.scaffold_27000005 Physcomitrella patens fgenesh1_pg.scaffold_27000005 I 0.669
gw1.12.332.1 Physcomitrella patens gw1.12.332.1 I 0.669
SELMODRAFT_149357 Selaginella moellendorffii SELMODRAFT_149357 I 0.669
Aquca_072_00114 Aquilegia coerulea Aquca_072_00114 I 0.662
gw1.47.44.1 Physcomitrella patens gw1.47.44.1 I 0.662
gene21073-v1.0-hybrid Fragaria vesca gene21073-v1.0-hybrid I 0.662
MDP0000187636 Malus domestica MDP0000187636 I 0.662
orange1.1g013552m.g Citrus sinensis orange1.1g013552m.g I 0.662
PDK_20s1491101g001 Phoenix dactylifera PDK_20s1491101g001 I 0.662
Gorai.007G287500 Gossypium raimondii Gorai.007G287500 I 0.662
Gorai.004G244800 Gossypium raimondii Gorai.004G244800 I 0.662
evm.TU.supercontig_785.2 Carica papaya evm.TU.supercontig_785.2 I 0.662
cassava22618.valid.m1 Manihot esculenta cassava22618.valid.m1 I 0.662
Ciclev10020171m.g Citrus clementina Ciclev10020171m.g I 0.662
TCM_026448 Theobroma cacao TCM_026448 I 0.662
GSMUA_Achr9G05030_001 Musa acuminata GSMUA_Achr9G05030_001 I 0.662
MTR_2g086450 Medicago truncatula MTR_2g086450 I 0.662
POPTR_0013s05670 Populus trichocarpa POPTR_0013s05670 I 0.662
GSMUA_Achr5G07670_001 Musa acuminata GSMUA_Achr5G07670_001 I 0.662
GRMZM2G081671 Zea mays GRMZM2G081671 I 0.662
GLYMA12G31020 Glycine max GLYMA12G31020 I 0.662
GLYMA13G39290 Glycine max GLYMA13G39290 I 0.662
POPTR_0019s04820 Populus trichocarpa POPTR_0019s04820 I 0.662
PRUPE_ppa015076mg Prunus persica PRUPE_ppa015076mg I 0.662
VIT_08s0007g07580 Vitis vinifera VIT_08s0007g07580 I 0.662
Ca_07058 Cicer arietinum Ca_07058 I 0.662
GLYMA11G18990 Glycine max GLYMA11G18990 I 0.662
SELMODRAFT_35907 Selaginella moellendorffii SELMODRAFT_35907 I 0.662
Pm025303 Prunus mume Pm025303 I 0.662
Sb10g026550 Sorghum bicolor Sb10g026550 I 0.662
EuGene.0700010469 Micromonas sp RCC299 EuGene.0700010469 I 0.661