CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.18.142.1
(
Volvox carteri
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
gw1.18.142.1
T285071_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB44
M01082_2.00
Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH7078
0.691
0.699
MYB44
M07155_2.00
Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD
Dap-seq
OMalley et al.(2016)
MYB44_colamp_a
0.691
0.699
MYB44
M07156_2.00
Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD
Dap-seq
OMalley et al.(2016)
MYB44_col
0.691
0.699
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.18.142.1
Myb
4
50
KGPWTPEEDTILRQLVMSQGPRNWTSIAACIPGRSGKSCRLRWLNQL
gw1.18.142.1
Myb
56
101
SGPFSAEEDAVILWAHMQYGNKWASIAKHLPGRTDNHIKNRWNCTL
Links
Other
Myb/SANT
family TFs
Other
Volvox carteri
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy