gw1.295.9.1 (Physcomitrella patens)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gw1.295.9.1 T285095_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.295.9.1 Myb 5 52
gw1.295.9.1 Myb 58 103

Links

Other Myb/SANT family TFs
Other Physcomitrella patens TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw1.46.242.1 Physcomitrella patens e_gw1.46.242.1 N 0.827
e_gw1.284.46.1 Physcomitrella patens e_gw1.284.46.1 N 0.821
e_gw1.204.95.1 Physcomitrella patens e_gw1.204.95.1 N 0.818
e_gw1.141.66.1 Physcomitrella patens e_gw1.141.66.1 N 0.788
Eucgr.C02280 Eucalyptus grandis Eucgr.C02280 I 0.731
Eucgr.C02391 Eucalyptus grandis Eucgr.C02391 I 0.731
Eucgr.F02207 Eucalyptus grandis Eucgr.F02207 I 0.728
cassava26191.m1 Manihot esculenta cassava26191.m1 N 0.726
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I 0.717
GLYMA10G06190 Glycine max GLYMA10G06190 I 0.713
GLYMA13G20510 Glycine max GLYMA13G20510 I 0.713
orange1.1g019787m.g Citrus sinensis orange1.1g019787m.g I 0.712
Ciclev10028804m.g Citrus clementina Ciclev10028804m.g I 0.712
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N 0.706
TCM_045715 Theobroma cacao TCM_045715 N 0.706
gene28902-v1.0-hybrid Fragaria vesca gene28902-v1.0-hybrid I 0.705
GSMUA_Achr9G09790_001 Musa acuminata GSMUA_Achr9G09790_001 I 0.705
VIT_17s0000g05400 Vitis vinifera VIT_17s0000g05400 I 0.704
orange1.1g017727m.g Citrus sinensis orange1.1g017727m.g I 0.703
mgf020328m Mimulus guttatus mgf020328m I 0.703
cassava22399.valid.m1 Manihot esculenta cassava22399.valid.m1 I 0.703
Cucsa.395340 Cucumis sativus Cucsa.395340 I 0.703
evm.TU.supercontig_95.69 Carica papaya evm.TU.supercontig_95.69 I 0.703
mgf024894m Mimulus guttatus mgf024894m I 0.703
Ciclev10010364m.g Citrus clementina Ciclev10010364m.g I 0.703
GLYMA0041S00310 Glycine max GLYMA0041S00310 I 0.703
Bo2g030240 Brassica oleracea Bo2g030240 I 0.700
Bra006811 Brassica rapa Bra006811 I 0.700
Cagra.2848s0043 Capsella grandiflora Cagra.2848s0043 I 0.700
Bostr.26833s0495 Boechera stricta Bostr.26833s0495 I 0.700
Thhalv10015689m.g Eutrema salsugineum Thhalv10015689m.g I 0.700
Bra020428 Brassica rapa Bra020428 I 0.700
Bo3g019230 Brassica oleracea Bo3g019230 I 0.700
Carubv10026749m.g Capsella rubella Carubv10026749m.g I 0.700
MYB36 Arabidopsis lyrata scaffold_802340.1 I 0.700
Bo9g133340 Brassica oleracea Bo9g133340 I 0.700
TCM_038898 Theobroma cacao TCM_038898 I 0.700
MYB36 Arabidopsis thaliana AT5G57620 I 0.700
VIT_00s1352g00010 Vitis vinifera VIT_00s1352g00010 I 0.699
Lus10028248.g Linum usitatissimum Lus10028248.g I 0.698
Lus10007248.g Linum usitatissimum Lus10007248.g I 0.698
cassava11642.m1 Manihot esculenta cassava11642.m1 I 0.697
GLYMA14G10340 Glycine max GLYMA14G10340 I 0.695
Cucsa.197410 Cucumis sativus Cucsa.197410 N 0.693
Gorai.013G246200 Gossypium raimondii Gorai.013G246200 I 0.692
Gorai.009G110800 Gossypium raimondii Gorai.009G110800 I 0.690
SapurV1A.1188s0040 Salix purpurea SapurV1A.1188s0040 I 0.690
cassava46793.m1 Manihot esculenta cassava46793.m1 I 0.689
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I 0.688
TCM_042012 Theobroma cacao TCM_042012 I 0.687
Pm001105 Prunus mume Pm001105 I 0.687
POPTR_0004s22490 Populus trichocarpa POPTR_0004s22490 I 0.687
Gorai.013G269300 Gossypium raimondii Gorai.013G269300 I 0.687
orange1.1g020997m.g Citrus sinensis orange1.1g020997m.g I 0.687
PRUPE_ppa007823mg Prunus persica PRUPE_ppa007823mg I 0.687
MDP0000229498 Malus domestica MDP0000229498 I 0.687
gene02643-v1.0-hybrid Fragaria vesca gene02643-v1.0-hybrid I 0.687
Ciclev10012151m.g Citrus clementina Ciclev10012151m.g I 0.687
Aquca_062_00019 Aquilegia coerulea Aquca_062_00019 I 0.687
BRADI4G38965 Brachypodium distachyon BRADI4G38965 I 0.687
AMTR_s00076p00157170 Amborella trichopoda AMTR_s00076p00157170 I 0.687
gene09663-v1.0-hybrid Fragaria vesca gene09663-v1.0-hybrid I 0.687
cassava27131.m1 Manihot esculenta cassava27131.m1 I 0.687
Ca_02249 Cicer arietinum Ca_02249 I 0.682
MTR_5g014990 Medicago truncatula MTR_5g014990 I 0.682
ATMYB35 Vitis vinifera VIT_14s0066g02180 N 0.681
Pm002200 Prunus mume Pm002200 I 0.679
Ca_03266 Cicer arietinum Ca_03266 I 0.679
Eucgr.C00190 Eucalyptus grandis Eucgr.C00190 I 0.679
GLYMA13G01200 Glycine max GLYMA13G01200 I 0.679
evm.TU.supercontig_129.59 Carica papaya evm.TU.supercontig_129.59 I 0.679
GLYMA17G07330 Glycine max GLYMA17G07330 I 0.679
MDP0000322479 Malus domestica MDP0000322479 I 0.679
LjSGA_033877.1 Lotus japonicus LjSGA_033877.1 I 0.679
PRUPE_ppa022431mg Prunus persica PRUPE_ppa022431mg I 0.679
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I 0.677
OB03G42660 Oryza brachyantha OB03G42660 I 0.676
Cucsa.306690 Cucumis sativus Cucsa.306690 I 0.675
Cla018072 Citrullus lanatus Cla018072 I 0.675
Gorai.004G231100 Gossypium raimondii Gorai.004G231100 I 0.675
Cagra.1838s0012 Capsella grandiflora Cagra.1838s0012 I 0.673
POPTR_0012s07450 Populus trichocarpa POPTR_0012s07450 N 0.673
Cucsa.353120 Cucumis sativus Cucsa.353120 I 0.673
GSMUA_Achr6G01850_001 Musa acuminata GSMUA_Achr6G01850_001 I 0.673
OGLUM03G35410 Oryza glumaepatula OGLUM03G35410 I 0.673
Carubv10018748m.g Capsella rubella Carubv10018748m.g I 0.673
MTR_1g017140 Medicago truncatula MTR_1g017140 I 0.673
LPERR03G29970 Leersia perrieri LPERR03G29970 I 0.673
OBART03G35660 Oryza barthii OBART03G35660 I 0.673
Ciclev10027178m.g Citrus clementina Ciclev10027178m.g I 0.673
gene05581-v1.0-hybrid Fragaria vesca gene05581-v1.0-hybrid I 0.673
SapurV1A.0004s0360 Salix purpurea SapurV1A.0004s0360 I 0.673
Pavir.Ia00427 Panicum virgatum Pavir.Ia00427 I 0.673
SapurV1A.0271s0250 Salix purpurea SapurV1A.0271s0250 I 0.673
PK05741.1 Cannabis sativa PK05741.1 I 0.673
LjSGA_044047.1 Lotus japonicus LjSGA_044047.1 I 0.673
PK26008.1 Cannabis sativa PK26008.1 I 0.673
orange1.1g036344m.g Citrus sinensis orange1.1g036344m.g I 0.673
BGIOSGA009746 Oryza indica BGIOSGA009746 I 0.673
GLYMA06G05260 Glycine max GLYMA06G05260 I 0.673
GLYMA11G04880 Glycine max GLYMA11G04880 I 0.673
Gorai.009G222900 Gossypium raimondii Gorai.009G222900 I 0.673
Gorai.010G028800 Gossypium raimondii Gorai.010G028800 I 0.673
Lus10006978.g Linum usitatissimum Lus10006978.g I 0.673
Lus10001316.g Linum usitatissimum Lus10001316.g I 0.673
GSMUA_Achr5G22760_001 Musa acuminata GSMUA_Achr5G22760_001 I 0.673
Bostr.6864s0273 Boechera stricta Bostr.6864s0273 I 0.673
VIT_18s0001g08470 Vitis vinifera VIT_18s0001g08470 I 0.673
ONIVA03G37150 Oryza nivara ONIVA03G37150 I 0.673
ORGLA03G0327000 Oryza glaberrima ORGLA03G0327000 I 0.673
cassava25562.m1 Manihot esculenta cassava25562.m1 I 0.673
TCM_034634 Theobroma cacao TCM_034634 I 0.673
OS03G0771100 Oryza sativa OS03G0771100 I 0.673
Cla021213 Citrullus lanatus Cla021213 I 0.673
Ca_09203 Cicer arietinum Ca_09203 I 0.673
RAX3 Arabidopsis lyrata Al_scaffold_0005_1808 I 0.673
ORUFI03G37090 Oryza rufipogon ORUFI03G37090 I 0.673
Cla014272 Citrullus lanatus Cla014272 I 0.673
TCM_000861 Theobroma cacao TCM_000861 I 0.673
OMERI03G32880 Oryza meridionalis OMERI03G32880 I 0.673
POPTR_0018s10390 Populus trichocarpa POPTR_0018s10390 I 0.673
OLONG_025560 Oryza longistaminata OLONG_025560 I 0.673
Cucsa.103470 Cucumis sativus Cucsa.103470 I 0.673
Si036681m.g Setaria italica Si036681m.g I 0.673
Sb01g006800 Sorghum bicolor Sb01g006800 I 0.673
MYB36 Vitis vinifera VIT_11s0052g01490 I 0.673
cassava26004.m1 Manihot esculenta cassava26004.m1 I 0.673
POPTR_0002s11440 Populus trichocarpa POPTR_0002s11440 I 0.673
OLONG_007639 Oryza longistaminata OLONG_007639 I 0.670
Gorai.008G086400 Gossypium raimondii Gorai.008G086400 I 0.670
Traes_6DL_29EF04226 Triticum aestivum Traes_6DL_29EF04226 I 0.670
BGIOSGA009166 Oryza indica BGIOSGA009166 I 0.670
Pavir.Ab03119 Panicum virgatum Pavir.Ab03119 I 0.670
Si017415m.g Setaria italica Si017415m.g I 0.670
PK16424.1 Cannabis sativa PK16424.1 I 0.670
Pavir.Aa00264 Panicum virgatum Pavir.Aa00264 I 0.670
TRIUR3_13802 Triticum urartu TRIUR3_13802 I 0.670
GLYMA01G40411 Glycine max GLYMA01G40411 I 0.670
Traes_6AL_FF1508B19 Triticum aestivum Traes_6AL_FF1508B19 I 0.670
OS02G0786400 Oryza sativa OS02G0786400 I 0.670
Gorai.009G006700 Gossypium raimondii Gorai.009G006700 I 0.670
Traes_6BL_7755E4A8A Triticum aestivum Traes_6BL_7755E4A8A I 0.670
Aquca_001_00247 Aquilegia coerulea Aquca_001_00247 I 0.670
MLOC_58499 Hordeum vulgare MLOC_58499 I 0.670
OPUNC02G32390 Oryza punctata OPUNC02G32390 I 0.670
OB02G41990 Oryza brachyantha OB02G41990 I 0.670
ONIVA02G37300 Oryza nivara ONIVA02G37300 I 0.670
OGLUM02G36330 Oryza glumaepatula OGLUM02G36330 I 0.670
OBART02G35180 Oryza barthii OBART02G35180 I 0.670
ORUFI02G36680 Oryza rufipogon ORUFI02G36680 I 0.670
ORGLA02G0304700 Oryza glaberrima ORGLA02G0304700 I 0.670
GRMZM2G015021 Zea mays GRMZM2G015021 I 0.670
LPERR02G28940 Leersia perrieri LPERR02G28940 I 0.670
MDP0000124049 Malus domestica MDP0000124049 I 0.668
Traes_5BL_C1D4586B1 Triticum aestivum Traes_5BL_C1D4586B1 I 0.666
MLOC_5098 Hordeum vulgare MLOC_5098 I 0.666
mgf021409m Mimulus guttatus mgf021409m I 0.666
F775_22184 Aegilops tauschii F775_22184 I 0.666
GLYMA19G36830 Glycine max GLYMA19G36830 I 0.666
TCM_022255 Theobroma cacao TCM_022255 I 0.666
RAX2 Arabidopsis thaliana AT2G36890 I 0.665
Cagra.0558s0004 Capsella grandiflora Cagra.0558s0004 I 0.665
Bra023085 Brassica rapa Bra023085 I 0.665
RAX2 Arabidopsis lyrata fgenesh2_kg.4__1732__AT2G36890.1 I 0.665
Bo4g031070 Brassica oleracea Bo4g031070 I 0.665
Bra005234 Brassica rapa Bra005234 I 0.665
Bo3g031390 Brassica oleracea Bo3g031390 I 0.665
Carubv10023744m.g Capsella rubella Carubv10023744m.g I 0.665
chr2.CM0021.150.nc Lotus japonicus chr2.CM0021.150.nc I 0.663
POPTR_0006s18620 Populus trichocarpa POPTR_0006s18620 I 0.663
PRUPE_ppa024417mg Prunus persica PRUPE_ppa024417mg I 0.663
LPERR03G12200 Leersia perrieri LPERR03G12200 I 0.663
MDP0000786507 Malus domestica MDP0000786507 I 0.663
MDP0000262514 Malus domestica MDP0000262514 I 0.663
MDP0000124992 Malus domestica MDP0000124992 I 0.663
Aquca_030_00066 Aquilegia coerulea Aquca_030_00066 I 0.663
GSMUA_Achr7G19530_001 Musa acuminata GSMUA_Achr7G19530_001 I 0.662
AMTR_s00044p00189590 Amborella trichopoda AMTR_s00044p00189590 I 0.661
Cla023198 Citrullus lanatus Cla023198 I 0.661
F775_02630 Aegilops tauschii F775_02630 I 0.661