CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.433.32.1
(
Physcomitrella patens
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
gw1.433.32.1
T285109_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK21166.1
M01281_2.00
Cannabis sativa
HACCWAMY
RKTWGGTD
PBM
Lambert et al.(2019)
pTH11255
0.681
0.731
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.433.32.1
Myb
14
61
RGPWAADEDKKLVSYINAHGVSCWRAIPKLAGLLRCGKSCRLRWTNYL
gw1.433.32.1
Myb
67
112
RGGFTDAEENLILDLHATLGNRWSKIAMQLPGRTDNEIKNYWNTHL
Links
Other
Myb/SANT
family TFs
Other
Physcomitrella patens
TFs
297 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy