gw1.76.8.1 (Physcomitrella patens)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gw1.76.8.1 T285135_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB56
M07130_2.00
Arabidopsis thaliana
DDHNHTAACKGWHWH

DWDWCMGTTADNDHH
Dap-seq
OMalley et al.(2016)
MYB56_col_a
0.785 0.806
MYB56
M07131_2.00
Arabidopsis thaliana
DNNHTAACGGWHWHD

HDWDWCCGTTADNNH
Dap-seq
OMalley et al.(2016)
MYB56_colamp_a
0.785 0.806
MYB52
M00871_2.00
Arabidopsis thaliana
NNNAMCNDNN

NNHNGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB52
0.781 0.817
MYB52
M07007_2.00
Arabidopsis thaliana
TAACGGTNHHD

HDDNACCGTTA
Dap-seq
OMalley et al.(2016)
MYB52_col_a
0.781 0.817
MYB105
M07031_2.00
Arabidopsis thaliana
TAACGGTWWHDDW

WHHDWWACCGTTA
Dap-seq
OMalley et al.(2016)
MYB105_col_a
0.766 0.860
MYB105
M07032_2.00
Arabidopsis thaliana
NNDWHDHTAACGGWWWH

DWWWCCGTTADHDWHNN
Dap-seq
OMalley et al.(2016)
MYB105_colamp_a
0.766 0.860
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.76.8.1 Myb 4 50
gw1.76.8.1 Myb 56 101

Links

Other Myb/SANT family TFs
Other Physcomitrella patens TFs

385 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CHGG_01519 Chaetomium globosum CHGG_01519 I 0.000
SNOG_01716 Stagonospora nodorum SNOG_01716 N 0.000
PTT_13179 Pyrenophora teres PTT_13179 N 0.000
PV06_10806 Exophiala oligosperma PV06_10806 N 0.000
SETTUDRAFT_168734 Setosphaeria turcica SETTUDRAFT_168734 N 0.000
UV8b_5742 Ustilaginoidea virens UV8b_5742 N 0.000
estExt_fgenesh1_pg.C_150217 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_150217 N 0.000
fgenesh1_pg.sca_3_chr4_2_0000426 Nectria haematococca fgenesh1_pg.sca_3_chr4_2_0000426 N 0.000
EFA77534.1 Polysphondylium pallidum EFA77534.1 N 0.000
AB06937.1 Alternaria brassicicola AB06937.1 N 0.000
PPAI008151 Phlebotomus papatasi PPAI008151 N 0.000
ANCCAN_05715 Ancylostoma caninum ANCCAN_05715 N 0.000
ANCDUO_24624 Ancylostoma duodenale ANCDUO_24624 N 0.000
ASIM_0000075001 Anisakis simplex ASIM_0000075001 N 0.000
PTRG_02598 Pyrenophora triticirepentis PTRG_02598 N 0.000
PFICI_01816 Pestalotiopsis fici PFICI_01816 N 0.000
NechaG79025 Fusarium solani NechaG79025 N 0.000
Cob_06475 Colletotrichum orbiculare Cob_06475 N 0.000
COCC4DRAFT_59869 Bipolaris maydis COCC4DRAFT_59869 N 0.000
COCCADRAFT_2680 Bipolaris zeicola COCCADRAFT_2680 N 0.000
COCMIDRAFT_6607 Bipolaris oryzae COCMIDRAFT_6607 N 0.000
COCSADRAFT_342303 Bipolaris sorokiniana COCSADRAFT_342303 N 0.000
COCVIDRAFT_22007 Bipolaris victoriae COCVIDRAFT_22007 N 0.000
GF20527 Drosophila ananassae FBgn0097533 N 0.000
H072_9301 Dactylellina haptotyla H072_9301 N 0.000
HCBG_01488 Histoplasma capsulatum HCBG_01488 N 0.000
HMPREF1624_05210 Sporothrix schenckii HMPREF1624_05210 N 0.000
LEMA_P000900.1 Leptosphaeria maculans LEMA_P000900.1 N 0.000
MAC_01051 Metarhizium acridum MAC_01051 N 0.000
DICVIV_04699 Dictyocaulus viviparus DICVIV_04699 N 0.000