Ocbimv22013214m.g (Octopus bimaculoides)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ocbimv22013214m.g T285444_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZZZ3
M01272_2.00
Homo sapiens
NSAATCCAWNN

NNWTGGATTSN
PBM
Lambert et al.(2019)
pTH11249
0.746 0.787
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22013214m.p Myb 178 229

Links

Other Myb/SANT family TFs
Other Octopus bimaculoides TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_02595 Aegilops tauschii F775_02595 N 0.000
F775_03870 Aegilops tauschii F775_03870 I 0.000
F775_04777 Aegilops tauschii F775_04777 I 0.000
BRADI1G32370 Brachypodium distachyon BRADI1G32370 N 0.000
MLOC_53958 Hordeum vulgare MLOC_53958 N 0.000
MLOC_67085 Hordeum vulgare MLOC_67085 N 0.000
MLOC_53840 Hordeum vulgare MLOC_53840 N 0.000
LPERR06G20200 Leersia perrieri LPERR06G20200 N 0.000
LPERR02G22340 Leersia perrieri LPERR02G22340 I 0.000
GSMUA_Achr7G03510_001 Musa acuminata GSMUA_Achr7G03510_001 I 0.000
GSMUA_Achr9G30700_001 Musa acuminata GSMUA_Achr9G30700_001 I 0.000
OBART06G24290 Oryza barthii OBART06G24290 N 0.000
OBART02G27470 Oryza barthii OBART02G27470 I 0.000
OBART02G05200 Oryza barthii OBART02G05200 I 0.000
OB06G32040 Oryza brachyantha OB06G32040 N 0.000
OB02G34860 Oryza brachyantha OB02G34860 I 0.000
ORGLA06G0204400 Oryza glaberrima ORGLA06G0204400 N 0.000
ORGLA02G0236600 Oryza glaberrima ORGLA02G0236600 I 0.000
ORGLA02G0047700 Oryza glaberrima ORGLA02G0047700 I 0.000
OGLUM06G25550 Oryza glumaepatula OGLUM06G25550 N 0.000
OGLUM02G05030 Oryza glumaepatula OGLUM02G05030 I 0.000
OGLUM02G28020 Oryza glumaepatula OGLUM02G28020 I 0.000
BGIOSGA007064 Oryza indica BGIOSGA007064 I 0.000
BGIOSGA008790 Oryza indica BGIOSGA008790 I 0.000
BGIOSGA023442 Oryza indica BGIOSGA023442 N 0.000
OLONG_000346 Oryza longistaminata OLONG_000346 I 0.000
OLONG_019167 Oryza longistaminata OLONG_019167 I 0.000
OLONG_026929 Oryza longistaminata OLONG_026929 N 0.000
OMERI02G26760 Oryza meridionalis OMERI02G26760 I 0.000
OMERI06G24530 Oryza meridionalis OMERI06G24530 N 0.000
ONIVA06G30620 Oryza nivara ONIVA06G30620 N 0.000
ONIVA02G30300 Oryza nivara ONIVA02G30300 I 0.000
ONIVA02G05430 Oryza nivara ONIVA02G05430 I 0.000
OPUNC02G04370 Oryza punctata OPUNC02G04370 I 0.000
OPUNC02G25130 Oryza punctata OPUNC02G25130 I 0.000
OPUNC06G22010 Oryza punctata OPUNC06G22010 N 0.000
ORUFI02G28930 Oryza rufipogon ORUFI02G28930 I 0.000
ORUFI02G05300 Oryza rufipogon ORUFI02G05300 I 0.000
ORUFI06G26110 Oryza rufipogon ORUFI06G26110 N 0.000
OS02G0168200 Oryza sativa OS02G0168200 I 0.000
OS06G0670300 Oryza sativa OS06G0670300 N 0.000
Pavir.J09702 Panicum virgatum Pavir.J09702 I 0.000
Pavir.Da00200 Panicum virgatum Pavir.Da00200 N 0.000
Pavir.Db00422 Panicum virgatum Pavir.Db00422 N 0.000
Pavir.Gb01051 Panicum virgatum Pavir.Gb01051 I 0.000
Si007179m.g Setaria italica Si007179m.g N 0.000
Si011884m.g Setaria italica Si011884m.g I 0.000
Sb04g032130 Sorghum bicolor Sb04g032130 I 0.000
Sb10g026930 Sorghum bicolor Sb10g026930 N 0.000
Sb06g025600 Sorghum bicolor Sb06g025600 I 0.000
TCM_001942 Theobroma cacao TCM_001942 I 0.000
Traes_7DL_FEA7D3672 Triticum aestivum Traes_7DL_FEA7D3672 N 0.000
Traes_7AL_BF6FD97DA Triticum aestivum Traes_7AL_BF6FD97DA N 0.000
Traes_7AL_9A1395EC7 Triticum aestivum Traes_7AL_9A1395EC7 I 0.000
TRIUR3_34172 Triticum urartu TRIUR3_34172 I 0.000
GRMZM2G454449 Zea mays GRMZM2G454449 N 0.000
GRMZM2G100709 Zea mays GRMZM2G100709 N 0.000