CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_002_00170
(
Aquilegia coerulea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Aquca_002_00170
T285481_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WER
M11047_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01
0.748
0.839
WER
M11048_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WEREWOLF_Q2
0.748
0.839
MYB23
M07133_2.00
Arabidopsis thaliana
HCAACWAHHHH
DDDDTWGTTGD
Dap-seq
OMalley et al.(2016)
MYB23_col_a
0.686
0.828
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.664
0.677
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_002_00170.1
Myb
9
56
RGLWTVEEDQILMDYIRVHGKGRWNRVAKLTGLKRCGKSCRLRWINYL
Aquca_002_00170.1
Myb
62
107
KGDFTEEEDDLIIRLHKLLGNRWSLIAGRVPGRTDNQVKNHWNTHL
Links
Other
Myb/SANT
family TFs
Other
Aquilegia coerulea
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_025_00333
Aquilegia coerulea
Aquca_025_00333
I
0.841
TCM_012057
Theobroma cacao
TCM_012057
I
0.806
TCM_016886
Theobroma cacao
TCM_016886
I
0.803
Pm024725
Prunus mume
Pm024725
I
0.793
VIT_17s0000g08480
Vitis vinifera
VIT_17s0000g08480
I
0.793
MDP0000650225
Malus domestica
MDP0000650225
I
0.788
cassava26193.m1
Manihot esculenta
cassava26193.m1
I
0.786
MDP0000537324
Malus domestica
MDP0000537324
I
0.776
Thhalv10005428m.g
Eutrema salsugineum
Thhalv10005428m.g
I
0.775
MDP0000578193
Malus domestica
MDP0000578193
I
0.775
SapurV1A.1404s0020
Salix purpurea
SapurV1A.1404s0020
I
0.774
PRUPE_ppa010908mg
Prunus persica
PRUPE_ppa010908mg
I
0.770
Pm006678
Prunus mume
Pm006678
I
0.767
SapurV1A.1178s0050
Salix purpurea
SapurV1A.1178s0050
I
0.765
Ciclev10032713m.g
Citrus clementina
Ciclev10032713m.g
I
0.764
Bra025311
Brassica rapa
Bra025311
I
0.760
VIT_01s0127g00730
Vitis vinifera
VIT_01s0127g00730
I
0.759
evm.TU.supercontig_124.57
Carica papaya
evm.TU.supercontig_124.57
I
0.758
MDP0000164048
Malus domestica
MDP0000164048
I
0.757
PRUPE_ppa014884mg
Prunus persica
PRUPE_ppa014884mg
I
0.756
Cagra.3166s0078
Capsella grandiflora
Cagra.3166s0078
I
0.748
WER
Arabidopsis thaliana
AT5G14750
D
0.748
Thhalv10014715m.g
Eutrema salsugineum
Thhalv10014715m.g
I
0.748
Bo2g012170
Brassica oleracea
Bo2g012170
I
0.748
Carubv10001990m.g
Capsella rubella
Carubv10001990m.g
I
0.748
WER
Arabidopsis lyrata
fgenesh2_kg.6__1454__AT5G14750.1
I
0.748
Bostr.2902s0211
Boechera stricta
Bostr.2902s0211
I
0.748
Bo7g090950
Brassica oleracea
Bo7g090950
I
0.748
Eucgr.B00373
Eucalyptus grandis
Eucgr.B00373
I
0.746
Gorai.012G061800
Gossypium raimondii
Gorai.012G061800
I
0.742
POPTR_0012s08190
Populus trichocarpa
POPTR_0012s08190
I
0.742
cassava27350.m1
Manihot esculenta
cassava27350.m1
I
0.741
VIT_14s0066g01220
Vitis vinifera
VIT_14s0066g01220
I
0.739
Bo9g165670
Brassica oleracea
Bo9g165670
I
0.731
Bra008740
Brassica rapa
Bra008740
I
0.731
Gorai.007G001800
Gossypium raimondii
Gorai.007G001800
I
0.726
Bostr.1460s0063
Boechera stricta
Bostr.1460s0063
I
0.725
POPTR_0015s08680
Populus trichocarpa
POPTR_0015s08680
I
0.725
gene32181-v1.0-hybrid
Fragaria vesca
gene32181-v1.0-hybrid
I
0.724
Eucgr.B03324
Eucalyptus grandis
Eucgr.B03324
N
0.717
Eucgr.J02212
Eucalyptus grandis
Eucgr.J02212
I
0.717
orange1.1g047269m.g
Citrus sinensis
orange1.1g047269m.g
I
0.716
VIT_11s0016g01300
Vitis vinifera
VIT_11s0016g01300
I
0.713
Bra023486
Brassica rapa
Bra023486
I
0.707
Carubv10018791m.g
Capsella rubella
Carubv10018791m.g
I
0.705
GL1
Arabidopsis thaliana
AT3G27920
I
0.705
Cagra.4961s0006
Capsella grandiflora
Cagra.4961s0006
I
0.705
GL1
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5000559
I
0.705
MDP0000266683
Malus domestica
MDP0000266683
I
0.702
TCM_010360
Theobroma cacao
TCM_010360
I
0.701
Bra039065
Brassica rapa
Bra039065
I
0.699
Eucgr.I01791
Eucalyptus grandis
Eucgr.I01791
I
0.698
Ciclev10017556m.g
Citrus clementina
Ciclev10017556m.g
I
0.697
Gorai.010G087200
Gossypium raimondii
Gorai.010G087200
I
0.690
GLYMA17G05831
Glycine max
GLYMA17G05831
I
0.690
GLYMA13G16890
Glycine max
GLYMA13G16890
I
0.690
POPTR_0015s08700
Populus trichocarpa
POPTR_0015s08700
I
0.689
Cagra.3160s0003
Capsella grandiflora
Cagra.3160s0003
I
0.686
Bra025589
Brassica rapa
Bra025589
I
0.686
MYB23
Arabidopsis thaliana
AT5G40330
D
0.686
Bostr.7200s0005
Boechera stricta
Bostr.7200s0005
I
0.686
Thhalv10028340m.g
Eutrema salsugineum
Thhalv10028340m.g
I
0.686
Carubv10005698m.g
Capsella rubella
Carubv10005698m.g
I
0.686
MDP0000199965
Malus domestica
MDP0000199965
I
0.685
Bostr.0556s0467
Boechera stricta
Bostr.0556s0467
I
0.681
SapurV1A.1178s0040
Salix purpurea
SapurV1A.1178s0040
N
0.680
cassava33302.m1
Manihot esculenta
cassava33302.m1
I
0.669
GSMUA_Achr3G07950_001
Musa acuminata
GSMUA_Achr3G07950_001
I
0.669
POPTR_0013s05310
Populus trichocarpa
POPTR_0013s05310
I
0.664
Q2TCH0_PETHY
Petunia x hybrida
Q2TCH0_PETHY
D
0.664
SapurV1A.1276s0060
Salix purpurea
SapurV1A.1276s0060
I
0.664
cassava9944.m1
Manihot esculenta
cassava9944.m1
I
0.662