CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_011_00344
(
Aquilegia coerulea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Aquca_011_00344
T285544_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07924.1
M01278_2.00
Cannabis sativa
NGATHYNNN
NNNRDATCN
PBM
Lambert et al.(2019)
pTH11431
0.760
0.936
ARR11
M00872_2.00
Arabidopsis thaliana
NRATHHNNN
NNNDDATYN
PBM
Franco-Zorrilla et al.(2014)
ARR11
0.707
0.894
ARR18
M02313_2.00
Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN
PBM
Weirauch et al.(2014)
pTH8840
0.668
0.809
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_011_00344.1
Myb
202
252
RVVWSVDLHQKFVNAVNLIGLDKVGPKKILDLMNVPWLTRENVASHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Aquilegia coerulea
TFs
125 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy