CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_023_00132
(
Aquilegia coerulea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Aquca_023_00132
T285578_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK15172.1
M01263_2.00
Cannabis sativa
NNNGTWAHWN
NWDTWACNNN
PBM
Lambert et al.(2019)
pTH10125
0.887
0.700
OS02G0104500
M02271_2.00
Oryza sativa
NDGTAAWWHN
NDWWTTACHN
PBM
Weirauch et al.(2014)
pTH8719
0.864
0.643
OS02G0104500
M02272_2.00
Oryza sativa
NDGTAAWWHN
NDWWTTACHN
PBM
Weirauch et al.(2014)
pTH9273
0.864
0.643
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_023_00132.1
Myb
76
109
PLKGPLWEAISRKLAEAGYNRSAKKCKEKFENIY
Aquca_023_00132.1
Myb
323
382
SSRWPKAEVQALITVRSNLENKYQGNVPKGSLWEEVSAAMGNLGCNRSAKRCKEKWENIN
Aquca_023_00132.2
MADF
185
257
SNLENKYQGNVPKGSLWEEVSAAMGNLGCNRSAKRCKEKWENINKYFKKVKESNKKRPGASKTCPYFNQLEAL
Links
Other
Myb/SANT
family TFs
Other
Aquilegia coerulea
TFs
73 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_21.195
Carica papaya
evm.TU.supercontig_21.195
I
0.926
Traes_1DL_772D1D7DF
Triticum aestivum
Traes_1DL_772D1D7DF
I
0.926
orange1.1g007316m.g
Citrus sinensis
orange1.1g007316m.g
I
0.926
MDP0000122269
Malus domestica
MDP0000122269
I
0.926
PK14727.1
Cannabis sativa
PK14727.1
I
0.926
Aquca_037_00343
Aquilegia coerulea
Aquca_037_00343
I
0.918
Pavir.Ga00673
Panicum virgatum
Pavir.Ga00673
I
0.917
Eucgr.D02541
Eucalyptus grandis
Eucgr.D02541
I
0.915
Traes_1AL_ED83D13D4
Triticum aestivum
Traes_1AL_ED83D13D4
I
0.911
MLOC_14207
Hordeum vulgare
MLOC_14207
I
0.911
Bo6g083670
Brassica oleracea
Bo6g083670
I
0.911
ORGLA04G0173400
Oryza glaberrima
ORGLA04G0173400
I
0.911
Lus10028584.g
Linum usitatissimum
Lus10028584.g
I
0.906
LjSGA_034643.2
Lotus japonicus
LjSGA_034643.2
I
0.905
Pavir.Ab02437
Panicum virgatum
Pavir.Ab02437
I
0.903
TRIUR3_29570
Triticum urartu
TRIUR3_29570
I
0.897
MLOC_22988
Hordeum vulgare
MLOC_22988
I
0.897
Pavir.J25029
Panicum virgatum
Pavir.J25029
I
0.892
BGIOSGA011584
Oryza indica
BGIOSGA011584
I
0.892
PK15172.1
Cannabis sativa
PK15172.1
D
0.887
Traes_4DL_DC6A55EEE
Triticum aestivum
Traes_4DL_DC6A55EEE
I
0.883
MLOC_70549
Hordeum vulgare
MLOC_70549
I
0.883
MLOC_74813
Hordeum vulgare
MLOC_74813
I
0.881
GSMUA_Achr7G04610_001
Musa acuminata
GSMUA_Achr7G04610_001
I
0.878
Pavir.Aa03569
Panicum virgatum
Pavir.Aa03569
I
0.877
GRMZM2G037128
Zea mays
GRMZM2G037128
I
0.877
Pavir.Ab00054
Panicum virgatum
Pavir.Ab00054
I
0.877
Sb04g000520
Sorghum bicolor
Sb04g000520
I
0.877
orange1.1g009174m.g
Citrus sinensis
orange1.1g009174m.g
I
0.877
Ciclev10010595m.g
Citrus clementina
Ciclev10010595m.g
I
0.877
OB02G10400
Oryza brachyantha
OB02G10400
I
0.869
ORGLA02G0003500
Oryza glaberrima
ORGLA02G0003500
I
0.864
GRMZM2G111760
Zea mays
GRMZM2G111760
I
0.864
OS02G0104500
Oryza sativa
OS02G0104500
D
0.864
OPUNC02G00050
Oryza punctata
OPUNC02G00050
I
0.864
ONIVA02G00390
Oryza nivara
ONIVA02G00390
I
0.864
OBART02G00380
Oryza barthii
OBART02G00380
I
0.864
OGLUM02G00360
Oryza glumaepatula
OGLUM02G00360
I
0.864
OMERI02G09240
Oryza meridionalis
OMERI02G09240
I
0.864
ORUFI02G00410
Oryza rufipogon
ORUFI02G00410
I
0.864
BGIOSGA007300
Oryza indica
BGIOSGA007300
I
0.864
POPTR_0018s05520
Populus trichocarpa
POPTR_0018s05520
I
0.862
SapurV1A.0435s0090
Salix purpurea
SapurV1A.0435s0090
I
0.862
POPTR_0018s05540
Populus trichocarpa
POPTR_0018s05540
I
0.862
POPTR_0310s00200
Populus trichocarpa
POPTR_0310s00200
I
0.862
Pavir.Ib03751
Panicum virgatum
Pavir.Ib03751
I
0.861
cassava25125.valid.m1
Manihot esculenta
cassava25125.valid.m1
I
0.856
SapurV1A.0655s0060
Salix purpurea
SapurV1A.0655s0060
I
0.856
LPERR02G00380
Leersia perrieri
LPERR02G00380
I
0.855
BRADI3G00697
Brachypodium distachyon
BRADI3G00697
I
0.852
POPTR_0006s23800
Populus trichocarpa
POPTR_0006s23800
I
0.851
29739.m003611
Ricinus communis
29739.m003611
I
0.851
Traes_6AS_52AE4A6E2
Triticum aestivum
Traes_6AS_52AE4A6E2
I
0.851
SapurV1A.0710s0040
Salix purpurea
SapurV1A.0710s0040
I
0.851
TRIUR3_30093
Triticum urartu
TRIUR3_30093
I
0.851
gene15385-v1.0-hybrid
Fragaria vesca
gene15385-v1.0-hybrid
I
0.845
Si033157m.g
Setaria italica
Si033157m.g
I
0.842
GSMUA_AchrUn_randomG03020_001
Musa acuminata
GSMUA_AchrUn_randomG03020_001
I
0.839
VIT_04s0008g01850
Vitis vinifera
VIT_04s0008g01850
I
0.835
MLOC_25460
Hordeum vulgare
MLOC_25460
I
0.824
GSMUA_Achr1G24120_001
Musa acuminata
GSMUA_Achr1G24120_001
I
0.820
Aquca_005_00325
Aquilegia coerulea
Aquca_005_00325
N
0.818
GLYMA09G01670
Glycine max
GLYMA09G01670
N
0.815
Ca_07908
Cicer arietinum
Ca_07908
N
0.814
cassava19027.valid.m1
Manihot esculenta
cassava19027.valid.m1
N
0.751
Eucgr.F02707
Eucalyptus grandis
Eucgr.F02707
N
0.714
Lus10018887.g
Linum usitatissimum
Lus10018887.g
N
0.708
Eucgr.F04239
Eucalyptus grandis
Eucgr.F04239
N
0.701
GLYMA02G09050
Glycine max
GLYMA02G09050
N
0.697
Lus10029778.g
Linum usitatissimum
Lus10029778.g
N
0.690
GLYMA20G30650
Glycine max
GLYMA20G30650
N
0.683
GRMZM2G314660
Zea mays
GRMZM2G314660
N
0.666
29576.m000224
Ricinus communis
29576.m000224
N
0.663