Bostr.0556s0002 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.0556s0002 T285649_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
e_gw1.362.4.1
M02341_2.00
Physcomitrella patens
NNNRDATCNN

NNGATHYNNN
PBM
Weirauch et al.(2014)
pTH8461
0.690 0.830
ARR14
M00873_2.00
Arabidopsis thaliana
NNAGATHCKS

SMGDATCTNN
PBM
Franco-Zorrilla et al.(2014)
ARR14
0.678 0.894
ARR14
M02293_2.00
Arabidopsis thaliana
NAGATHYBNN

NNVRDATCTN
PBM
Weirauch et al.(2014)
pTH7531
0.678 0.894
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00
Ostreococcus tauri
NNNDATCN

NGATHNNN
PBM
Weirauch et al.(2014)
pTH9644
0.663 0.787
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.0556s0002.1.p Myb 3 53

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cagra.2235s0034 Capsella grandiflora Cagra.2235s0034 I 0.738
mgf010113m Mimulus guttatus mgf010113m I 0.738
Carubv10018465m.g Capsella rubella Carubv10018465m.g I 0.738
mgf012203m Mimulus guttatus mgf012203m I 0.738
Eucgr.G02094 Eucalyptus grandis Eucgr.G02094 I 0.736
Solyc04g008050.2 Solanum lycopersicum Solyc04g008050.2 I 0.736
evm.TU.supercontig_2.186 Carica papaya evm.TU.supercontig_2.186 I 0.736
PGSC0003DMG400029514 Solanum tuberosum PGSC0003DMG400029514 I 0.736
Gorai.005G156900 Gossypium raimondii Gorai.005G156900 I 0.736
TCM_011067 Theobroma cacao TCM_011067 I 0.736
Ciclev10014527m.g Citrus clementina Ciclev10014527m.g I 0.736
27647.m000179 Ricinus communis 27647.m000179 I 0.736
ARR14 Vitis vinifera VIT_01s0011g05830 I 0.736
orange1.1g005938m.g Citrus sinensis orange1.1g005938m.g I 0.736
AMTR_s00176p00045260 Amborella trichopoda AMTR_s00176p00045260 I 0.736
Aquca_091_00086 Aquilegia coerulea Aquca_091_00086 I 0.736
POPTR_0010s11600 Populus trichocarpa POPTR_0010s11600 I 0.736
SapurV1A.0055s0320 Salix purpurea SapurV1A.0055s0320 I 0.736
GSMUA_Achr1G22230_001 Musa acuminata GSMUA_Achr1G22230_001 I 0.736
GSMUA_Achr8G30850_001 Musa acuminata GSMUA_Achr8G30850_001 I 0.736
TCM_021300 Theobroma cacao TCM_021300 I 0.729
Ciclev10004470m.g Citrus clementina Ciclev10004470m.g I 0.729
SELMODRAFT_450181 Selaginella moellendorffii SELMODRAFT_450181 I 0.729
Eucgr.A00189 Eucalyptus grandis Eucgr.A00189 I 0.729
GLYMA17G03380 Glycine max GLYMA17G03380 I 0.729
Solyc05g054390.2 Solanum lycopersicum Solyc05g054390.2 I 0.729
VIT_05s0077g01480 Vitis vinifera VIT_05s0077g01480 I 0.729
cassava43032.valid.m1 Manihot esculenta cassava43032.valid.m1 I 0.729
Cucsa.252760 Cucumis sativus Cucsa.252760 I 0.729
PK26059.1 Cannabis sativa PK26059.1 I 0.729
29889.m003245 Ricinus communis 29889.m003245 I 0.729
GLYMA07G37220 Glycine max GLYMA07G37220 I 0.729
Ca_02989 Cicer arietinum Ca_02989 I 0.729
Cla009424 Citrullus lanatus Cla009424 I 0.729
Cla022101 Citrullus lanatus Cla022101 I 0.729
SELMODRAFT_173793 Selaginella moellendorffii SELMODRAFT_173793 I 0.729
Solyc01g065540.2 Solanum lycopersicum Solyc01g065540.2 I 0.729
Gorai.002G029200 Gossypium raimondii Gorai.002G029200 I 0.729
PGSC0003DMG400023534 Solanum tuberosum PGSC0003DMG400023534 I 0.729
MTR_4g121020 Medicago truncatula MTR_4g121020 I 0.729
Gorai.011G196400 Gossypium raimondii Gorai.011G196400 I 0.729
MDP0000290818 Malus domestica MDP0000290818 I 0.729
MDP0000224740 Malus domestica MDP0000224740 I 0.729
PGSC0003DMG401025624 Solanum tuberosum PGSC0003DMG401025624 I 0.729
evm.TU.supercontig_9.105 Carica papaya evm.TU.supercontig_9.105 I 0.729
Aquca_003_00615 Aquilegia coerulea Aquca_003_00615 I 0.729
PRUPE_ppa002408mg Prunus persica PRUPE_ppa002408mg I 0.729
POPTR_0010s00320 Populus trichocarpa POPTR_0010s00320 I 0.729
POPTR_0008s22990 Populus trichocarpa POPTR_0008s22990 I 0.729
GLYMA15G15520 Glycine max GLYMA15G15520 I 0.723
PDK_20s13009423g003 Phoenix dactylifera PDK_20s13009423g003 I 0.717
Gorai.006G259700 Gossypium raimondii Gorai.006G259700 I 0.714
gene05178-v1.0-hybrid Fragaria vesca gene05178-v1.0-hybrid I 0.709
evm.TU.supercontig_2.187 Carica papaya evm.TU.supercontig_2.187 I 0.699
e_gw1.362.4.1 Physcomitrella patens e_gw1.362.4.1 D 0.690
GSMUA_Achr11G05340_001 Musa acuminata GSMUA_Achr11G05340_001 I 0.690
SapurV1A.0739s0030 Salix purpurea SapurV1A.0739s0030 I 0.689
PDK_20s1451831g001 Phoenix dactylifera PDK_20s1451831g001 I 0.683
Cucsa.069440 Cucumis sativus Cucsa.069440 I 0.683
cassava40494.m1 Manihot esculenta cassava40494.m1 I 0.683
estExt_fgenesh2_pg.C_Chr_100175 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_100175 I 0.681
EuGene.0000130210 Micromonas pusilla EuGene.0000130210 I 0.681
GLYMA09G04470 Glycine max GLYMA09G04470 I 0.680
ARR14 Arabidopsis thaliana AT2G01760 D 0.678
ARR14 Arabidopsis lyrata scaffold_500093.1 I 0.678
SapurV1A.0015s0530 Salix purpurea SapurV1A.0015s0530 I 0.676
Pavir.Ib00921 Panicum virgatum Pavir.Ib00921 I 0.676
Pavir.Ia04946 Panicum virgatum Pavir.Ia04946 I 0.676
Traes_4DL_2527CA8BF Triticum aestivum Traes_4DL_2527CA8BF I 0.676
OGLUM03G09080 Oryza glumaepatula OGLUM03G09080 I 0.676
OBART03G08950 Oryza barthii OBART03G08950 I 0.676
OLONG_002370 Oryza longistaminata OLONG_002370 I 0.676
OMERI03G08390 Oryza meridionalis OMERI03G08390 I 0.676
OPUNC03G08640 Oryza punctata OPUNC03G08640 I 0.676
ONIVA06G01160 Oryza nivara ONIVA06G01160 I 0.676
OB03G19140 Oryza brachyantha OB03G19140 I 0.676
LPERR03G08040 Leersia perrieri LPERR03G08040 I 0.676
BRADI1G69480 Brachypodium distachyon BRADI1G69480 I 0.676
RR21 Oryza indica BGIOSGA012149 I 0.676
F775_32153 Aegilops tauschii F775_32153 I 0.676
GRMZM2G099797 Zea mays GRMZM2G099797 I 0.676
GRMZM2G126834 Zea mays GRMZM2G126834 I 0.676
ORGLA03G0086800 Oryza glaberrima ORGLA03G0086800 I 0.676
ORUFI03G09090 Oryza rufipogon ORUFI03G09090 I 0.676
Traes_4AS_6486B493A Triticum aestivum Traes_4AS_6486B493A I 0.676
Traes_4BL_941E7DE4D Triticum aestivum Traes_4BL_941E7DE4D I 0.676
TRIUR3_25342 Triticum urartu TRIUR3_25342 I 0.676
Sb01g042400 Sorghum bicolor Sb01g042400 I 0.676
Si034517m.g Setaria italica Si034517m.g I 0.676
RR21 Oryza sativa OS03G0224200 I 0.676
POPTR_0008s13490 Populus trichocarpa POPTR_0008s13490 I 0.676
SELMODRAFT_418787 Selaginella moellendorffii SELMODRAFT_418787 I 0.671
SELMODRAFT_187683 Selaginella moellendorffii SELMODRAFT_187683 I 0.671
e_gw1.1.548.1 Coccomyxa subellipsoidea C169 e_gw1.1.548.1 I 0.670
Ciclev10004989m.g Citrus clementina Ciclev10004989m.g I 0.669
e_gw1.10.288.1 Physcomitrella patens e_gw1.10.288.1 I 0.664
e_gw1.1.649.1 Ostreococcus RCC809 e_gw1.1.649.1 I 0.663
estExt_fgenesh1_pg.C_Chr_16.00010090 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_16.00010090 D 0.663
OSTLU_5500 Ostreococcus lucimarinus OSTLU_5500 I 0.663