Bostr.22252s0001 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.22252s0001 T285756_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT4G09450
M01080_2.00 		Arabidopsis thaliana
NNTTATCYN
NRGATAANN		 PBM
Sullivan et al.(2014)
pTH7072 		0.663 0.700
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.22252s0001.1.p Myb 5 52
Bostr.22252s0001.1.p Myb 94 139

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.19424s0976 Boechera stricta Bostr.19424s0976 N 0.795
Bostr.19424s0980 Boechera stricta Bostr.19424s0980 N 0.780
Bostr.19424s0981 Boechera stricta Bostr.19424s0981 I 0.778
fgenesh1_pg.C_scaffold_3000957 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000957 N 0.766
AT4G09450 Arabidopsis thaliana AT4G09450 D 0.663
fgenesh1_pg.C_scaffold_6002605 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6002605 N 0.661