Bostr.22252s0130 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.22252s0130 T285759_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB3R5
M07116_2.00
Arabidopsis thaliana
NWWWWNTDRCCGTTR

YAACGGYHANWWWWN
Dap-seq
OMalley et al.(2016)
MYB3R5_col_a
0.768 0.893
Q948S5_TOBAC
M11074_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBA2_01
0.691 0.786
PK12011.1
M01279_2.00
Cannabis sativa
HAACGGHHNN

NNDDCCGTTD
PBM
Lambert et al.(2019)
pTH11423
0.664 0.779
PC-MYB1
M07110_2.00
Arabidopsis thaliana
NDWWNTDRCCGTTRN

NYAACGGYHANWWHN
Dap-seq
OMalley et al.(2016)
MYB3R1_col_a
0.664 0.736
PC-MYB1
M07111_2.00
Arabidopsis thaliana
DWHNTDRCCGTTR

YAACGGYHANDWH
Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a
0.664 0.736
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.22252s0130.1.p Myb 82 128
Bostr.22252s0130.1.p Myb 134 180
Bostr.22252s0130.1.p Myb 186 231
Bostr.22252s0130.2.p Myb 79 125
Bostr.22252s0130.2.p Myb 131 177
Bostr.22252s0130.2.p Myb 183 228

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

Invalid Input OrderBy

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action