Bostr.23794s0264 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.23794s0264 T285766_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT2G38090
M07055_2.00
Arabidopsis thaliana
HHBAWNYTTATCYWNWHYNBN

NVNRDWNWRGATAARNWTVDD
Dap-seq
OMalley et al.(2016)
At2g38090_col_a
0.892 0.968
PK27693.1
M01285_2.00
Cannabis sativa
NNYTATCBNN

NNVGATARNN
PBM
Lambert et al.(2019)
pTH11302
0.785 0.883
PK27213.1
M01284_2.00
Cannabis sativa
NHWATCNNNN

NNNNGATWDN
PBM
Lambert et al.(2019)
pTH10196
0.736 0.819
PK27213.1
M02356_2.00
Cannabis sativa
NHHATCNNNN

NNNNGATDDN
PBM
Weirauch et al.(2014)
pTH9600
0.736 0.819
AT5G58900
M07146_2.00
Arabidopsis thaliana
HHWWYCTTATCYWHW

WDWRGATAAGRWWDD
Dap-seq
OMalley et al.(2016)
At5g58900_col_a
0.661 0.809
AT5G58900
M07147_2.00
Arabidopsis thaliana
HWYMTTATCHWNWWH

DWWNWDGATAAKRWD
Dap-seq
OMalley et al.(2016)
At5g58900_colamp_a
0.661 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.23794s0264.1.p Myb 140 187

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bostr.18473s0167 Boechera stricta Bostr.18473s0167 I 0.000
PGSC0003DMG401024463 Solanum tuberosum PGSC0003DMG401024463 I 0.000
ONIVA11G11880 Oryza nivara ONIVA11G11880 I 0.000
OGLUM11G11800 Oryza glumaepatula OGLUM11G11800 I 0.000
MLOC_57269 Hordeum vulgare MLOC_57269 I 0.000
Pavir.J14571 Panicum virgatum Pavir.J14571 N 0.000
gene00752-v1.0-hybrid Fragaria vesca gene00752-v1.0-hybrid N 0.000
Gorai.002G116400 Gossypium raimondii Gorai.002G116400 N 0.000
Gorai.004G212900 Gossypium raimondii Gorai.004G212900 N 0.000
PDK_20s1475851g002 Phoenix dactylifera PDK_20s1475851g002 N 0.000
Gorai.010G090500 Gossypium raimondii Gorai.010G090500 N 0.000
Pavir.Ea03809 Panicum virgatum Pavir.Ea03809 N 0.000
PDK_20s1360531g001 Phoenix dactylifera PDK_20s1360531g001 N 0.000
BGIOSGA015290 Oryza indica BGIOSGA015290 N 0.000
Aquca_005_00610 Aquilegia coerulea Aquca_005_00610 N 0.000
TRIUR3_17846 Triticum urartu TRIUR3_17846 N 0.000
Traes_3AL_531BE8073 Triticum aestivum Traes_3AL_531BE8073 N 0.000
ORUFI06G11220 Oryza rufipogon ORUFI06G11220 N 0.000
ONIVA06G12430 Oryza nivara ONIVA06G12430 N 0.000
OGLUM06G11560 Oryza glumaepatula OGLUM06G11560 N 0.000
OBART11G12110 Oryza barthii OBART11G12110 N 0.000
BRADI4G34870 Brachypodium distachyon BRADI4G34870 N 0.000
PDK_20s1499141g001 Phoenix dactylifera PDK_20s1499141g001 N 0.000