Bostr.2570s0262 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.2570s0262 T285791_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PHL1
M02310_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7122 		0.791 0.905
PHL1
M07132_2.00 		Arabidopsis thaliana
MDRGAATATTCBNWN
NWNVGAATATTCYHK		 Dap-seq
OMalley et al.(2016)
At5g29000_col_a 		0.791 0.905
PHR1
M02302_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7249 		0.674 0.810
PHL7
M02292_2.00 		Arabidopsis thaliana
NWGATDCBNN
NNVGHATCWN		 PBM
Weirauch et al.(2014)
pTH7253 		0.661 0.714
PK10342.1
M02351_2.00 		Cannabis sativa
WAGATKCS
SGMATCTW		 PBM
Weirauch et al.(2014)
pTH9489 		0.661 0.714
PHL7
M07040_2.00 		Arabidopsis thaliana
DRNAKATTCBNHNNN
NNNDNVGAATMTNYH		 Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a 		0.661 0.714
PHL7
M07041_2.00 		Arabidopsis thaliana
VGAATATTCBNHH
DDNVGAATATTCB		 Dap-seq
OMalley et al.(2016)
At2g01060_col 		0.661 0.714
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.2570s0262.1.p Myb 156 202

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

235 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo5g148190 Brassica oleracea Bo5g148190 I 0.822
Cagra.4031s0031 Capsella grandiflora Cagra.4031s0031 I 0.822
Bra040196 Brassica rapa Bra040196 I 0.822
Thhalv10020942m.g Eutrema salsugineum Thhalv10020942m.g I 0.822
Carubv10013867m.g Capsella rubella Carubv10013867m.g I 0.814
fgenesh1_pm.C_scaffold_3000324 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000324 I 0.813
Lus10008197.g Linum usitatissimum Lus10008197.g I 0.791
PHL1 Arabidopsis lyrata fgenesh2_kg.6__2806__AT5G29000.2 I 0.791
Bostr.23151s0001 Boechera stricta Bostr.23151s0001 I 0.791
Carubv10002022m.g Capsella rubella Carubv10002022m.g I 0.791
PHL1 Arabidopsis thaliana AT5G29000 D 0.791
VIT_14s0036g01380 Vitis vinifera VIT_14s0036g01380 I 0.786
Gorai.007G274700 Gossypium raimondii Gorai.007G274700 I 0.785
MTR_7g115530 Medicago truncatula MTR_7g115530 I 0.783
Bra020622 Brassica rapa Bra020622 I 0.780
Carubv10001064m.g Capsella rubella Carubv10001064m.g I 0.780
Bo2g151830 Brassica oleracea Bo2g151830 I 0.780
Thhalv10004351m.g Eutrema salsugineum Thhalv10004351m.g I 0.776
PHL13 Arabidopsis thaliana AT3G04450 I 0.776
POPTR_0019s03750 Populus trichocarpa POPTR_0019s03750 I 0.773
SapurV1A.0307s0080 Salix purpurea SapurV1A.0307s0080 I 0.773
POPTR_0013s04530 Populus trichocarpa POPTR_0013s04530 I 0.773
cassava31821.valid.m1 Manihot esculenta cassava31821.valid.m1 I 0.773
Eucgr.B02155 Eucalyptus grandis Eucgr.B02155 I 0.764
SapurV1A.0309s0130 Salix purpurea SapurV1A.0309s0130 I 0.762
VIT_07s0005g04120 Vitis vinifera VIT_07s0005g04120 I 0.752
Ca_12255 Cicer arietinum Ca_12255 I 0.752
MTR_7g098250 Medicago truncatula MTR_7g098250 I 0.752
Bo9g010090 Brassica oleracea Bo9g010090 I 0.752
29637.m000753 Ricinus communis 29637.m000753 I 0.752
MDP0000285150 Malus domestica MDP0000285150 I 0.752
orange1.1g011805m.g Citrus sinensis orange1.1g011805m.g I 0.752
TCM_003939 Theobroma cacao TCM_003939 I 0.752
Ciclev10019956m.g Citrus clementina Ciclev10019956m.g I 0.752
MDP0000321461 Malus domestica MDP0000321461 I 0.752
cassava37547.valid.m1 Manihot esculenta cassava37547.valid.m1 I 0.752
PK01035.1 Cannabis sativa PK01035.1 I 0.752
GLYMA10G04540 Glycine max GLYMA10G04540 I 0.752
GLYMA13G18805 Glycine max GLYMA13G18805 I 0.752
Gorai.007G149100 Gossypium raimondii Gorai.007G149100 I 0.752
chr1.CM0295.930.nd Lotus japonicus chr1.CM0295.930.nd I 0.752
Bra036123 Brassica rapa Bra036123 I 0.752
GLYMA19G35080 Glycine max GLYMA19G35080 I 0.752
GLYMA03G32350 Glycine max GLYMA03G32350 I 0.752
PRUPE_ppa005708mg Prunus persica PRUPE_ppa005708mg I 0.744
MTR_1g080330 Medicago truncatula MTR_1g080330 I 0.744
LjSGA_026114.1 Lotus japonicus LjSGA_026114.1 I 0.744
GLYMA19G43690 Glycine max GLYMA19G43690 I 0.744
Ca_03781 Cicer arietinum Ca_03781 I 0.744
Pm003600 Prunus mume Pm003600 I 0.744
PRUPE_ppa004886mg Prunus persica PRUPE_ppa004886mg I 0.740
Thhalv10002005m.g Eutrema salsugineum Thhalv10002005m.g I 0.734
Cucsa.027530 Cucumis sativus Cucsa.027530 I 0.731
cassava44101.valid.m1 Manihot esculenta cassava44101.valid.m1 I 0.731
29680.m001711 Ricinus communis 29680.m001711 I 0.731
Cla003565 Citrullus lanatus Cla003565 I 0.731
gene16679-v1.0-hybrid Fragaria vesca gene16679-v1.0-hybrid I 0.726
Gorai.004G023100 Gossypium raimondii Gorai.004G023100 I 0.719
Lus10029607.g Linum usitatissimum Lus10029607.g I 0.712
Lus10032778.g Linum usitatissimum Lus10032778.g I 0.712
Solyc05g055940.2 Solanum lycopersicum Solyc05g055940.2 I 0.704
orange1.1g014308m.g Citrus sinensis orange1.1g014308m.g I 0.704
PGSC0003DMG400023467 Solanum tuberosum PGSC0003DMG400023467 I 0.704
Ciclev10004984m.g Citrus clementina Ciclev10004984m.g I 0.704
Si035682m.g Setaria italica Si035682m.g I 0.703
GRMZM2G006477 Zea mays GRMZM2G006477 I 0.703
Pavir.J39104 Panicum virgatum Pavir.J39104 I 0.703
Pavir.Ia03429 Panicum virgatum Pavir.Ia03429 I 0.703
Sb01g036440 Sorghum bicolor Sb01g036440 I 0.703
GSMUA_Achr5G12960_001 Musa acuminata GSMUA_Achr5G12960_001 I 0.703
GSMUA_Achr8G12580_001 Musa acuminata GSMUA_Achr8G12580_001 I 0.703
Lus10024938.g Linum usitatissimum Lus10024938.g I 0.703
AMTR_s00142p00049490 Amborella trichopoda AMTR_s00142p00049490 I 0.703
Aquca_034_00282 Aquilegia coerulea Aquca_034_00282 I 0.701
PDK_20s1349221g001 Phoenix dactylifera PDK_20s1349221g001 N 0.698
Bo7g113230 Brassica oleracea Bo7g113230 I 0.695
Solyc06g008200.2 Solanum lycopersicum Solyc06g008200.2 I 0.692
evm.TU.supercontig_87.3 Carica papaya evm.TU.supercontig_87.3 I 0.692
Eucgr.A01323 Eucalyptus grandis Eucgr.A01323 I 0.692
TCM_026171 Theobroma cacao TCM_026171 I 0.692
SapurV1A.0252s0390 Salix purpurea SapurV1A.0252s0390 I 0.692
gene08317-v1.0-hybrid Fragaria vesca gene08317-v1.0-hybrid I 0.691
Sb02g010520 Sorghum bicolor Sb02g010520 I 0.691
Si029945m.g Setaria italica Si029945m.g I 0.691
Pavir.Ba02554 Panicum virgatum Pavir.Ba02554 I 0.691
MDP0000248927 Malus domestica MDP0000248927 I 0.691
Pavir.Bb01566 Panicum virgatum Pavir.Bb01566 I 0.691
PDK_20s1306081g005 Phoenix dactylifera PDK_20s1306081g005 I 0.691
GSMUA_Achr11G02560_001 Musa acuminata GSMUA_Achr11G02560_001 I 0.691
30169.m006598 Ricinus communis 30169.m006598 I 0.689
Lus10022885.g Linum usitatissimum Lus10022885.g I 0.688
Bostr.7903s0128 Boechera stricta Bostr.7903s0128 I 0.685
scaffold_304362.1 Arabidopsis lyrata scaffold_304362.1 I 0.685
MDP0000132340 Malus domestica MDP0000132340 I 0.684
cassava22661.valid.m1 Manihot esculenta cassava22661.valid.m1 I 0.682
POPTR_0002s25960 Populus trichocarpa POPTR_0002s25960 I 0.680
PDK_20s1384631g001 Phoenix dactylifera PDK_20s1384631g001 I 0.677
mgf005047m Mimulus guttatus mgf005047m I 0.674
Cucsa.037070 Cucumis sativus Cucsa.037070 I 0.674
PHR1 Arabidopsis lyrata fgenesh2_kg.7__1335__AT4G28610.1 I 0.674
Thhalv10025330m.g Eutrema salsugineum Thhalv10025330m.g I 0.674
Bra010355 Brassica rapa Bra010355 I 0.674
Bo8g054450 Brassica oleracea Bo8g054450 I 0.674
Cagra.1225s0029 Capsella grandiflora Cagra.1225s0029 I 0.674
Bostr.7867s0704 Boechera stricta Bostr.7867s0704 I 0.674
Solyc09g072830.2 Solanum lycopersicum Solyc09g072830.2 I 0.674
PHR1 Arabidopsis thaliana AT4G28610 D 0.674
AMTR_s00026p00153500 Amborella trichopoda AMTR_s00026p00153500 I 0.673
GSMUA_Achr4G30200_001 Musa acuminata GSMUA_Achr4G30200_001 I 0.671
PK16227.1 Cannabis sativa PK16227.1 I 0.668
cassava35980.valid.m1 Manihot esculenta cassava35980.valid.m1 I 0.667
cassava35979.valid.m1 Manihot esculenta cassava35979.valid.m1 I 0.667
orange1.1g011006m.g Citrus sinensis orange1.1g011006m.g I 0.667
Lus10035705.g Linum usitatissimum Lus10035705.g I 0.667
TCM_027630 Theobroma cacao TCM_027630 I 0.667
GSMUA_Achr10G23260_001 Musa acuminata GSMUA_Achr10G23260_001 I 0.667
Gorai.011G001500 Gossypium raimondii Gorai.011G001500 I 0.667
SapurV1A.0703s0050 Salix purpurea SapurV1A.0703s0050 I 0.667
cassava39270.m1 Manihot esculenta cassava39270.m1 I 0.667
POPTR_0007s15110 Populus trichocarpa POPTR_0007s15110 I 0.667
Gorai.009G120900 Gossypium raimondii Gorai.009G120900 I 0.667
evm.TU.supercontig_10.14 Carica papaya evm.TU.supercontig_10.14 I 0.667
AMTR_s00025p00224230 Amborella trichopoda AMTR_s00025p00224230 I 0.667
PDK_20s1523411g004 Phoenix dactylifera PDK_20s1523411g004 I 0.667
Ciclev10030185m.g Citrus clementina Ciclev10030185m.g I 0.667
GLYMA03G41040 Glycine max GLYMA03G41040 I 0.666
chr1.CM0600.200.nd Lotus japonicus chr1.CM0600.200.nd I 0.666
VIT_08s0040g00100 Vitis vinifera VIT_08s0040g00100 I 0.665
AMTR_s00095p00071020 Amborella trichopoda AMTR_s00095p00071020 I 0.665
evm.TU.supercontig_33.181 Carica papaya evm.TU.supercontig_33.181 I 0.665
chr1.CM0098.390.nd Lotus japonicus chr1.CM0098.390.nd I 0.665
GLYMA19G30220 Glycine max GLYMA19G30220 I 0.665
Cucsa.337130 Cucumis sativus Cucsa.337130 I 0.665
GLYMA03G00590 Glycine max GLYMA03G00590 I 0.665
MDP0000232923 Malus domestica MDP0000232923 I 0.665
Ca_08144 Cicer arietinum Ca_08144 I 0.665
MTR_7g088070 Medicago truncatula MTR_7g088070 I 0.665
Pm025479 Prunus mume Pm025479 I 0.665
PRUPE_ppa009512mg Prunus persica PRUPE_ppa009512mg I 0.665
Aquca_009_00105 Aquilegia coerulea Aquca_009_00105 I 0.665
Cla017754 Citrullus lanatus Cla017754 I 0.665
MDP0000323121 Malus domestica MDP0000323121 I 0.665
gene27918-v1.0-hybrid Fragaria vesca gene27918-v1.0-hybrid I 0.665
OS04G0665600 Oryza sativa OS04G0665600 I 0.664
Pavir.Ga00160 Panicum virgatum Pavir.Ga00160 I 0.664
BGIOSGA014151 Oryza indica BGIOSGA014151 I 0.664
Si022099m.g Setaria italica Si022099m.g I 0.664
GRMZM2G035370 Zea mays GRMZM2G035370 I 0.664
ORUFI04G30350 Oryza rufipogon ORUFI04G30350 I 0.664
OB04G35670 Oryza brachyantha OB04G35670 I 0.664
OBART04G28680 Oryza barthii OBART04G28680 I 0.664
OLONG_005000 Oryza longistaminata OLONG_005000 I 0.664
OGLUM04G28560 Oryza glumaepatula OGLUM04G28560 I 0.664
LPERR04G24240 Leersia perrieri LPERR04G24240 I 0.664
OPUNC04G26200 Oryza punctata OPUNC04G26200 I 0.664
OMERI04G24260 Oryza meridionalis OMERI04G24260 I 0.664
ONIVA04G27220 Oryza nivara ONIVA04G27220 I 0.664
ORGLA04G0249600 Oryza glaberrima ORGLA04G0249600 I 0.664
Sb06g031970 Sorghum bicolor Sb06g031970 I 0.664
Pavir.Bb01632 Panicum virgatum Pavir.Bb01632 I 0.661
PDK_20s1467851g002 Phoenix dactylifera PDK_20s1467851g002 I 0.661
evm.TU.supercontig_27.185 Carica papaya evm.TU.supercontig_27.185 I 0.661
orange1.1g020124m.g Citrus sinensis orange1.1g020124m.g I 0.661
Lus10037296.g Linum usitatissimum Lus10037296.g I 0.661
PK10342.1 Cannabis sativa PK10342.1 D 0.661
gene19867-v1.0-hybrid Fragaria vesca gene19867-v1.0-hybrid I 0.661
Pavir.Ba02820 Panicum virgatum Pavir.Ba02820 I 0.661
MDP0000323119 Malus domestica MDP0000323119 I 0.661
SapurV1A.0220s0460 Salix purpurea SapurV1A.0220s0460 I 0.661
PDK_20s1369041g001 Phoenix dactylifera PDK_20s1369041g001 I 0.661
SapurV1A.0089s0170 Salix purpurea SapurV1A.0089s0170 I 0.661
Thhalv10000981m.g Eutrema salsugineum Thhalv10000981m.g I 0.661
Ca_07939 Cicer arietinum Ca_07939 I 0.661
ORGLA09G0034900 Oryza glaberrima ORGLA09G0034900 I 0.661
ORUFI09G05110 Oryza rufipogon ORUFI09G05110 I 0.661
OPUNC09G03970 Oryza punctata OPUNC09G03970 I 0.661
ONIVA09G04730 Oryza nivara ONIVA09G04730 I 0.661
OBART09G04530 Oryza barthii OBART09G04530 I 0.661
OGLUM09G05280 Oryza glumaepatula OGLUM09G05280 I 0.661
OS09G0299200 Oryza sativa OS09G0299200 I 0.661
PGSC0003DMG400007401 Solanum tuberosum PGSC0003DMG400007401 I 0.661
PRUPE_ppa009121mg Prunus persica PRUPE_ppa009121mg I 0.661
Sb02g020700 Sorghum bicolor Sb02g020700 I 0.661
POPTR_0016s00310 Populus trichocarpa POPTR_0016s00310 I 0.661
POPTR_0014s00280 Populus trichocarpa POPTR_0014s00280 I 0.661
PGSC0003DMG400008786 Solanum tuberosum PGSC0003DMG400008786 I 0.661
POPTR_0006s00290 Populus trichocarpa POPTR_0006s00290 I 0.661
OB09G12870 Oryza brachyantha OB09G12870 I 0.661
MTR_2g027860 Medicago truncatula MTR_2g027860 I 0.661
Bra024909 Brassica rapa Bra024909 I 0.661
BRADI4G27620 Brachypodium distachyon BRADI4G27620 I 0.661
Bo7g077990 Brassica oleracea Bo7g077990 I 0.661
BGIOSGA030474 Oryza indica BGIOSGA030474 I 0.661
AMTR_s00061p00095620 Amborella trichopoda AMTR_s00061p00095620 I 0.661
PHL7 Arabidopsis thaliana AT2G01060 D 0.661
F775_09661 Aegilops tauschii F775_09661 I 0.661
fgenesh2_kg.5__3__AT2G01060.1 Arabidopsis lyrata fgenesh2_kg.5__3__AT2G01060.1 I 0.661
LPERR09G03210 Leersia perrieri LPERR09G03210 I 0.661
MLOC_60074 Hordeum vulgare MLOC_60074 I 0.661
GSMUA_Achr3G28410_001 Musa acuminata GSMUA_Achr3G28410_001 I 0.661
GRMZM2G173943 Zea mays GRMZM2G173943 I 0.661
GLYMA09G02040 Glycine max GLYMA09G02040 I 0.661
GLYMA15G12940 Glycine max GLYMA15G12940 I 0.661
SELMODRAFT_405399 Selaginella moellendorffii SELMODRAFT_405399 I 0.661
SELMODRAFT_447260 Selaginella moellendorffii SELMODRAFT_447260 I 0.661
mgf003647m Mimulus guttatus mgf003647m I 0.661
mgf006394m Mimulus guttatus mgf006394m I 0.661
mgf002744m Mimulus guttatus mgf002744m I 0.661
Cucsa.044390 Cucumis sativus Cucsa.044390 I 0.661
cassava36260.valid.m1 Manihot esculenta cassava36260.valid.m1 I 0.661
cassava36261.valid.m1 Manihot esculenta cassava36261.valid.m1 I 0.661
mgf007291m Mimulus guttatus mgf007291m I 0.661
mgf012689m Mimulus guttatus mgf012689m I 0.661
Carubv10017769m.g Capsella rubella Carubv10017769m.g I 0.661
Ciclev10015893m.g Citrus clementina Ciclev10015893m.g I 0.661
Cagra.2315s0003 Capsella grandiflora Cagra.2315s0003 I 0.661
Bostr.7903s0063 Boechera stricta Bostr.7903s0063 I 0.661
mgf014369m Mimulus guttatus mgf014369m I 0.661
mgf015945m Mimulus guttatus mgf015945m I 0.661
cassava13407.valid.m1 Manihot esculenta cassava13407.valid.m1 I 0.661
cassava13406.valid.m1 Manihot esculenta cassava13406.valid.m1 I 0.661
Traes_5AL_6F77CFB03 Triticum aestivum Traes_5AL_6F77CFB03 I 0.661
Traes_5BL_A2C97A02D Triticum aestivum Traes_5BL_A2C97A02D I 0.661
TCM_030480 Theobroma cacao TCM_030480 I 0.661
Solyc11g067280.1 Solanum lycopersicum Solyc11g067280.1 I 0.661
Si030592m.g Setaria italica Si030592m.g I 0.661
Solyc11g022470.1 Solanum lycopersicum Solyc11g022470.1 I 0.661
Traes_5DL_EB47672ED Triticum aestivum Traes_5DL_EB47672ED I 0.661
TRIUR3_29870 Triticum urartu TRIUR3_29870 I 0.661
Pm009657 Prunus mume Pm009657 I 0.661
29805.m001544 Ricinus communis 29805.m001544 I 0.661
Cla014593 Citrullus lanatus Cla014593 I 0.661
VIT_09s0054g01620 Vitis vinifera VIT_09s0054g01620 I 0.661
VIT_00s0475g00040 Vitis vinifera VIT_00s0475g00040 I 0.661
Eucgr.E04232 Eucalyptus grandis Eucgr.E04232 I 0.661