Bostr.26675s0216 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.26675s0216 T285806_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HHO6
M07024_2.00
Arabidopsis thaliana
GAATCTNNDAT

ATHNNAGATTC
Dap-seq
OMalley et al.(2016)
AT1G49560_col_a
0.909 0.979
HHO6
M07025_2.00
Arabidopsis thaliana
DGAATCTHNGATHCN

NGDATCNDAGATTCH
Dap-seq
OMalley et al.(2016)
AT1G49560_colamp_a
0.909 0.979
HHO2
M02290_2.00
Arabidopsis thaliana
NNKATHCNNN

NNNGDATMNN
PBM
Weirauch et al.(2014)
pTH7115
0.840 0.872
HHO2
M07029_2.00
Arabidopsis thaliana
AKATTCY

RGAATMT
Dap-seq
OMalley et al.(2016)
At1g68670_colamp_a
0.840 0.872
HHO2
M07030_2.00
Arabidopsis thaliana
RDATYNNAGATTC

GAATCTNNRATHY
Dap-seq
OMalley et al.(2016)
At1g68670_col
0.840 0.872
NIGT1
M02328_2.00
Oryza sativa
NNKATHCNNN

NNNGDATMNN
PBM
Weirauch et al.(2014)
pTH8646
0.830 0.872
HHO3
M02289_2.00
Arabidopsis thaliana
NWGATWCBNN

NNVGWATCWN
PBM
Weirauch et al.(2014)
pTH7278
0.822 0.851
HHO3
M07016_2.00
Arabidopsis thaliana
NNDHNNAAKATTCY

RGAATMTTNNDHNN
Dap-seq
OMalley et al.(2016)
At1g25550_colamp_a
0.822 0.851
HHO3
M07017_2.00
Arabidopsis thaliana
HNNAAKATTCY

RGAATMTTNND
Dap-seq
OMalley et al.(2016)
At1g25550_col
0.822 0.851
PK19779.1
M02354_2.00
Cannabis sativa
NNKATNCNNN

NNNGNATMNN
PBM
Weirauch et al.(2014)
pTH9610
0.781 0.830
PK14402.1
M02352_2.00
Cannabis sativa
NDWGATTCSNN

NNSGAATCWHN
PBM
Weirauch et al.(2014)
pTH9491
0.780 0.851
EFM
M07044_2.00
Arabidopsis thaliana
NNGAATATTCY

RGAATATTCNN
Dap-seq
OMalley et al.(2016)
At2g03500_col_a
0.776 0.851
EFM
M07045_2.00
Arabidopsis thaliana
RGAATCHWAGATTC

GAATCTWDGATTCY
Dap-seq
OMalley et al.(2016)
At2g03500_colamp_a
0.776 0.851
HRS1
M02284_2.00
Arabidopsis thaliana
AGATTCYN

NRGAATCT
PBM
Weirauch et al.(2014)
pTH7118
0.751 0.830
HRS1
M01068_2.00
Arabidopsis thaliana
NAGATTCBNN

NNVGAATCTN
PBM
Sullivan et al.(2014)
pTH7648
0.751 0.830
HRS1
M07004_2.00
Arabidopsis thaliana
NDDWWVNAAKATTCY

RGAATMTTNBWWHHN
Dap-seq
OMalley et al.(2016)
At1g13300_col_a
0.751 0.830
HHO5
M07112_2.00
Arabidopsis thaliana
HNDAAGATTCH

DGAATCTTHND
Dap-seq
OMalley et al.(2016)
AT4G37180_col_a
0.669 0.809
HHO5
M07113_2.00
Arabidopsis thaliana
NNDAAGATTCY

RGAATCTTHNN
Dap-seq
OMalley et al.(2016)
AT4G37180_colamp_a
0.669 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.26675s0216.1.p Myb 199 250

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

362 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000006001 Ailuropoda melanoleuca ENSAMEG00000006001 N 0.000
ENSBTAP00000044076-D1 Bos grunniens ENSBTAP00000044076-D1 N 0.000
TERF1 Bos taurus ENSBTAG00000032982 N 0.000
TERF1 Callithrix jacchus ENSCJAG00000007714 N 0.000
TERF1 Canis familiaris ENSCAFG00000007975 N 0.000
TERF1 Cavia porcellus ENSCPOG00000009638 N 0.000
ENSCSAG00000013598 Chlorocebus sabaeus ENSCSAG00000013598 N 0.000
TERF1 Choloepus hoffmanni ENSCHOG00000002407 N 0.000
ENSDNOG00000011332 Dasypus novemcinctus ENSDNOG00000011332 N 0.000
Terf1 Dipodomys ordii ENSDORG00000003657 N 0.000
TERF1 Equus caballus ENSECAG00000011894 N 0.000
TERF1 Erinaceus europaeus ENSEEUG00000008963 N 0.000
TERF1 Gorilla gorilla ENSGGOG00000026727 N 0.000
ENSGGOG00000025393 Gorilla gorilla ENSGGOG00000025393 N 0.000
TERF1 Homo sapiens ENSG00000147601 N 0.000
ENSSTOG00000025051 Ictidomys tridecemlineatus ENSSTOG00000025051 N 0.000
ENSSTOG00000026069 Ictidomys tridecemlineatus ENSSTOG00000026069 N 0.000
ENSSTOG00000004560 Ictidomys tridecemlineatus ENSSTOG00000004560 N 0.000
TERF1 Loxodonta africana ENSLAFG00000004308 N 0.000
ENSP00000276603 Macaca fascicularis ENSP00000276603 N 0.000
TERF1 Macaca mulatta ENSMMUG00000023208 N 0.000
ENSMODG00000025642 Monodelphis domestica ENSMODG00000025642 N 0.000
ENSMPUG00000010251 Mustela putorius furo ENSMPUG00000010251 N 0.000
Terf1 Mus musculus ENSMUSG00000025925 N 0.000
Myotis_brandtii_TERF1_10031667 Myotis brandtii Myotis_brandtii_TERF1_10031667 N 0.000
TERF1 Myotis lucifugus ENSMLUG00000012171 N 0.000
TERF1 Ornithorhynchus anatinus ENSOANG00000001722 N 0.000
ENSOCUG00000002793 Oryctolagus cuniculus ENSOCUG00000002793 N 0.000
ENSOARG00000005381 Ovis aries ENSOARG00000005381 N 0.000
TERF1 Pan troglodytes ENSPTRG00000022919 N 0.000
ENSPANG00000025943 Papio anubis ENSPANG00000025943 N 0.000
ENSPPYG00000003709 Pongo abelii ENSPPYG00000003709 N 0.000
ENSPPYG00000018261 Pongo abelii ENSPPYG00000018261 N 0.000
ENSPPYG00000018669 Pongo abelii ENSPPYG00000018669 N 0.000
TERF1 Procavia capensis ENSPCAG00000007698 N 0.000
TERF1 Pteropus vampyrus ENSPVAG00000003792 N 0.000
TERF1 Sus scrofa ENSSSCG00000006184 N 0.000
TERF1 Tupaia belangeri ENSTBEG00000011779 N 0.000
TERF1 Tursiops truncatus ENSTTRG00000003745 N 0.000
TERF1 Vicugna pacos ENSVPAG00000000533 N 0.000