CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.2902s0211
(
Boechera stricta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Bostr.2902s0211
T285839_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WER
M11047_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01
0.909
0.989
WER
M11048_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WEREWOLF_Q2
0.909
0.989
MYB23
M07133_2.00
Arabidopsis thaliana
HCAACWAHHHH
DDDDTWGTTGD
Dap-seq
OMalley et al.(2016)
MYB23_col_a
0.817
0.946
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.2902s0211.1.p
Myb
18
65
KGLWTVEEDKILMDYVKAQGKGHWNRIAKKTGLKRCGKSCRLRWMNYL
Bostr.2902s0211.1.p
Myb
71
116
RGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHL
Links
Other
Myb/SANT
family TFs
Other
Boechera stricta
TFs
98 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10001990m.g
Capsella rubella
Carubv10001990m.g
I
0.909
Cagra.3166s0078
Capsella grandiflora
Cagra.3166s0078
I
0.909
WER
Arabidopsis lyrata
fgenesh2_kg.6__1454__AT5G14750.1
I
0.909
Bo2g012170
Brassica oleracea
Bo2g012170
I
0.909
Thhalv10014715m.g
Eutrema salsugineum
Thhalv10014715m.g
I
0.909
WER
Arabidopsis thaliana
AT5G14750
D
0.909
Bo9g165670
Brassica oleracea
Bo9g165670
I
0.892
Bra008740
Brassica rapa
Bra008740
I
0.892
Bostr.1460s0063
Boechera stricta
Bostr.1460s0063
I
0.871
Cagra.3160s0003
Capsella grandiflora
Cagra.3160s0003
I
0.817
Bostr.7200s0005
Boechera stricta
Bostr.7200s0005
I
0.817
Bra025589
Brassica rapa
Bra025589
I
0.817
Carubv10005698m.g
Capsella rubella
Carubv10005698m.g
I
0.817
MYB23
Arabidopsis thaliana
AT5G40330
D
0.817
Bra023486
Brassica rapa
Bra023486
I
0.811
Eucgr.J02212
Eucalyptus grandis
Eucgr.J02212
I
0.806
Thhalv10028340m.g
Eutrema salsugineum
Thhalv10028340m.g
I
0.802
cassava26193.m1
Manihot esculenta
cassava26193.m1
I
0.791
Thhalv10005428m.g
Eutrema salsugineum
Thhalv10005428m.g
I
0.791
Pm024725
Prunus mume
Pm024725
I
0.786
Bra025311
Brassica rapa
Bra025311
I
0.786
TCM_016886
Theobroma cacao
TCM_016886
I
0.781
MDP0000578193
Malus domestica
MDP0000578193
I
0.776
TCM_012057
Theobroma cacao
TCM_012057
I
0.775
Bo7g090950
Brassica oleracea
Bo7g090950
I
0.775
SapurV1A.1178s0050
Salix purpurea
SapurV1A.1178s0050
I
0.773
PRUPE_ppa010908mg
Prunus persica
PRUPE_ppa010908mg
I
0.770
VIT_17s0000g08480
Vitis vinifera
VIT_17s0000g08480
I
0.764
cassava27350.m1
Manihot esculenta
cassava27350.m1
I
0.764
Bra039065
Brassica rapa
Bra039065
I
0.763
VIT_14s0066g01220
Vitis vinifera
VIT_14s0066g01220
I
0.760
MDP0000650225
Malus domestica
MDP0000650225
I
0.759
GL1
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5000559
I
0.758
GL1
Arabidopsis thaliana
AT3G27920
I
0.758
Aquca_025_00333
Aquilegia coerulea
Aquca_025_00333
I
0.751
POPTR_0012s08190
Populus trichocarpa
POPTR_0012s08190
I
0.750
Aquca_002_00170
Aquilegia coerulea
Aquca_002_00170
I
0.748
evm.TU.supercontig_124.57
Carica papaya
evm.TU.supercontig_124.57
I
0.747
Carubv10018791m.g
Capsella rubella
Carubv10018791m.g
I
0.742
Cagra.4961s0006
Capsella grandiflora
Cagra.4961s0006
I
0.742
Ciclev10017556m.g
Citrus clementina
Ciclev10017556m.g
I
0.741
Gorai.007G001800
Gossypium raimondii
Gorai.007G001800
I
0.741
SapurV1A.1404s0020
Salix purpurea
SapurV1A.1404s0020
I
0.740
Eucgr.B00373
Eucalyptus grandis
Eucgr.B00373
I
0.738
Eucgr.I01791
Eucalyptus grandis
Eucgr.I01791
I
0.735
Gorai.012G061800
Gossypium raimondii
Gorai.012G061800
I
0.733
POPTR_0015s08680
Populus trichocarpa
POPTR_0015s08680
I
0.733
TCM_010360
Theobroma cacao
TCM_010360
I
0.726
MDP0000199965
Malus domestica
MDP0000199965
I
0.726
Bostr.0556s0467
Boechera stricta
Bostr.0556s0467
I
0.718
POPTR_0015s08700
Populus trichocarpa
POPTR_0015s08700
I
0.713
TCM_005112
Theobroma cacao
TCM_005112
I
0.695
Eucgr.D02390
Eucalyptus grandis
Eucgr.D02390
I
0.695
MDP0000915330
Malus domestica
MDP0000915330
I
0.695
Gorai.008G126700
Gossypium raimondii
Gorai.008G126700
I
0.695
PK14784.1
Cannabis sativa
PK14784.1
I
0.695
evm.TU.supercontig_96.57
Carica papaya
evm.TU.supercontig_96.57
I
0.695
gene18691-v1.0-hybrid
Fragaria vesca
gene18691-v1.0-hybrid
I
0.695
VIT_15s0046g00170
Vitis vinifera
VIT_15s0046g00170
I
0.695
gene32181-v1.0-hybrid
Fragaria vesca
gene32181-v1.0-hybrid
I
0.695
Pm018338
Prunus mume
Pm018338
I
0.692
PRUPE_ppa009439mg
Prunus persica
PRUPE_ppa009439mg
I
0.692
30068.m002544
Ricinus communis
30068.m002544
I
0.692
cassava34176.m1
Manihot esculenta
cassava34176.m1
I
0.692
MDP0000537324
Malus domestica
MDP0000537324
I
0.691
Gorai.004G151000
Gossypium raimondii
Gorai.004G151000
I
0.691
Cla011528
Citrullus lanatus
Cla011528
I
0.688
VIT_01s0127g00730
Vitis vinifera
VIT_01s0127g00730
I
0.686
MDP0000164048
Malus domestica
MDP0000164048
I
0.683
POPTR_0003s14420
Populus trichocarpa
POPTR_0003s14420
I
0.683
PRUPE_ppa014884mg
Prunus persica
PRUPE_ppa014884mg
I
0.683
POPTR_0001s11100
Populus trichocarpa
POPTR_0001s11100
I
0.683
Pm006678
Prunus mume
Pm006678
I
0.683
PDK_20s1716541g001
Phoenix dactylifera
PDK_20s1716541g001
I
0.683
SapurV1A.0059s0150
Salix purpurea
SapurV1A.0059s0150
I
0.683
LjT16O05.150.nd
Lotus japonicus
LjT16O05.150.nd
I
0.682
orange1.1g047269m.g
Citrus sinensis
orange1.1g047269m.g
I
0.680
Ciclev10032713m.g
Citrus clementina
Ciclev10032713m.g
I
0.680
SapurV1A.0013s0160
Salix purpurea
SapurV1A.0013s0160
I
0.674
POPTR_0014s09630
Populus trichocarpa
POPTR_0014s09630
I
0.674
MDP0000266683
Malus domestica
MDP0000266683
I
0.674
Gorai.004G150800
Gossypium raimondii
Gorai.004G150800
I
0.673
POPTR_0002s17460
Populus trichocarpa
POPTR_0002s17460
I
0.672
SapurV1A.0035s0040
Salix purpurea
SapurV1A.0035s0040
I
0.671
Eucgr.C00721
Eucalyptus grandis
Eucgr.C00721
I
0.671
cassava7672.valid.m1
Manihot esculenta
cassava7672.valid.m1
I
0.671
Eucgr.D01701
Eucalyptus grandis
Eucgr.D01701
I
0.670
MTR_8g027345
Medicago truncatula
MTR_8g027345
I
0.669
Ca_17627
Cicer arietinum
Ca_17627
I
0.666
Gorai.004G130900
Gossypium raimondii
Gorai.004G130900
I
0.666
Ciclev10021571m.g
Citrus clementina
Ciclev10021571m.g
I
0.665
orange1.1g040841m.g
Citrus sinensis
orange1.1g040841m.g
I
0.665
orange1.1g025602m.g
Citrus sinensis
orange1.1g025602m.g
I
0.664
Ciclev10009286m.g
Citrus clementina
Ciclev10009286m.g
I
0.664
Cucsa.304110
Cucumis sativus
Cucsa.304110
I
0.663
TCM_004509
Theobroma cacao
TCM_004509
I
0.663
Eucgr.C00724
Eucalyptus grandis
Eucgr.C00724
I
0.663
GLYMA10G35050
Glycine max
GLYMA10G35050
I
0.663