CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.29505s0026
(
Boechera stricta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Bostr.29505s0026
T285846_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AtMYB81
M07049_2.00
Arabidopsis thaliana
VTAACNGHWWH
DWWDCNGTTAB
Dap-seq
OMalley et al.(2016)
MYB81_col_a
0.796
0.884
AtMYB81
M07050_2.00
Arabidopsis thaliana
DHHNYAACBGHWWH
DWWDCVGTTRNDDH
Dap-seq
OMalley et al.(2016)
MYB81_colamp_a
0.796
0.884
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.29505s0026.1.p
Myb
22
67
KGPWTQVEDNLLIDYVDKHGDGNWNAVQKHSGLSRCGKSCRLRWKK
Bostr.29505s0026.1.p
Myb
66
106
KKEEKRVIELHALLGNRWERMAVELPGRTDNEIKNFWNTRL
Links
Other
Myb/SANT
family TFs
Other
Boechera stricta
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AtMYB81
Arabidopsis lyrata
Al_scaffold_0004_975
I
0.809
Carubv10025403m.g
Capsella rubella
Carubv10025403m.g
I
0.800
Cagra.9104s0001
Capsella grandiflora
Cagra.9104s0001
I
0.800
AtMYB81
Arabidopsis thaliana
AT2G26960
D
0.796
Bostr.6864s0293
Boechera stricta
Bostr.6864s0293
I
0.783
Thhalv10002011m.g
Eutrema salsugineum
Thhalv10002011m.g
I
0.744
Bra000531
Brassica rapa
Bra000531
I
0.734
Bo3g041750
Brassica oleracea
Bo3g041750
I
0.734
Bo4g076940
Brassica oleracea
Bo4g076940
I
0.688