CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.3148s0040
(
Boechera stricta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Bostr.3148s0040
T285859_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GPRI1
M00874_2.00
Arabidopsis thaliana
NNDATHN
NDATHNN
PBM
Franco-Zorrilla et al.(2014)
GLK1
0.791
0.894
APRR2
M02300_2.00
Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN
PBM
Weirauch et al.(2014)
pTH7102
0.719
0.872
ARR1
M02297_2.00
Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN
PBM
Weirauch et al.(2014)
pTH8590
0.672
0.723
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.3148s0040.1.p
Myb
148
198
KVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Boechera stricta
TFs
157 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy