Bostr.7200s0005 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.7200s0005 T285900_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB23
M07133_2.00
Arabidopsis thaliana
HCAACWAHHHH

DDDDTWGTTGD
Dap-seq
OMalley et al.(2016)
MYB23_col_a
0.909 1.000
WER
M11047_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01
0.817 0.957
WER
M11048_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WEREWOLF_Q2
0.817 0.957
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.7200s0005.1.p Myb 14 61
Bostr.7200s0005.1.p Myb 67 112

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MYB23 Arabidopsis thaliana AT5G40330 D 0.909
Bra025589 Brassica rapa Bra025589 I 0.909
Carubv10005698m.g Capsella rubella Carubv10005698m.g I 0.909
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I 0.909
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I 0.893
Bra008740 Brassica rapa Bra008740 I 0.834
Bo9g165670 Brassica oleracea Bo9g165670 I 0.834
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I 0.817
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I 0.817
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I 0.817
WER Arabidopsis thaliana AT5G14750 D 0.817
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I 0.817
Bo2g012170 Brassica oleracea Bo2g012170 I 0.817
Carubv10001990m.g Capsella rubella Carubv10001990m.g I 0.817
Bostr.1460s0063 Boechera stricta Bostr.1460s0063 I 0.813
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I 0.755
Carubv10018791m.g Capsella rubella Carubv10018791m.g I 0.755
Bra025311 Brassica rapa Bra025311 I 0.754
Bo7g090950 Brassica oleracea Bo7g090950 I 0.743
GL1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000559 I 0.741
GL1 Arabidopsis thaliana AT3G27920 I 0.741
Bostr.0556s0467 Boechera stricta Bostr.0556s0467 I 0.731
Bra039065 Brassica rapa Bra039065 I 0.731
cassava26193.m1 Manihot esculenta cassava26193.m1 I 0.729
Pm024725 Prunus mume Pm024725 I 0.724
Bra023486 Brassica rapa Bra023486 I 0.720
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I 0.719
TCM_016886 Theobroma cacao TCM_016886 I 0.719
Eucgr.I01791 Eucalyptus grandis Eucgr.I01791 I 0.718
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I 0.716
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I 0.714
MDP0000578193 Malus domestica MDP0000578193 I 0.714
TCM_012057 Theobroma cacao TCM_012057 I 0.713
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I 0.713
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I 0.711
TCM_010360 Theobroma cacao TCM_010360 I 0.709
MDP0000199965 Malus domestica MDP0000199965 I 0.709
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I 0.708
cassava27350.m1 Manihot esculenta cassava27350.m1 I 0.703
Gorai.004G150800 Gossypium raimondii Gorai.004G150800 I 0.703
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I 0.700
MDP0000650225 Malus domestica MDP0000650225 I 0.697
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.691
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I 0.690
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I 0.689
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.689
Cla011528 Citrullus lanatus Cla011528 I 0.688
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I 0.686
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I 0.685
LjT16O05.150.nd Lotus japonicus LjT16O05.150.nd I 0.682
Ciclev10017556m.g Citrus clementina Ciclev10017556m.g I 0.680
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.680
Eucgr.E01031 Eucalyptus grandis Eucgr.E01031 I 0.680
SapurV1A.1404s0020 Salix purpurea SapurV1A.1404s0020 I 0.678
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I 0.676
LjT02E24.130.nc Lotus japonicus LjT02E24.130.nc I 0.675
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.675
MDP0000537324 Malus domestica MDP0000537324 I 0.674
Gorai.012G061800 Gossypium raimondii Gorai.012G061800 I 0.672
PK01088.1 Cannabis sativa PK01088.1 I 0.672
POPTR_0015s08680 Populus trichocarpa POPTR_0015s08680 I 0.671
cassava2597.m1 Manihot esculenta cassava2597.m1 I 0.670
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I 0.669
MDP0000264051 Malus domestica MDP0000264051 I 0.667
MDP0000164048 Malus domestica MDP0000164048 I 0.666
LjT02E24.110.nc Lotus japonicus LjT02E24.110.nc I 0.666
Pm006678 Prunus mume Pm006678 I 0.666
PRUPE_ppa014884mg Prunus persica PRUPE_ppa014884mg I 0.666
cassava32672.m1 Manihot esculenta cassava32672.m1 I 0.666
LjT02E24.60.nc Lotus japonicus LjT02E24.60.nc I 0.666
orange1.1g040841m.g Citrus sinensis orange1.1g040841m.g I 0.665
PK14784.1 Cannabis sativa PK14784.1 I 0.665
MDP0000915330 Malus domestica MDP0000915330 I 0.665
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.665
Ciclev10021571m.g Citrus clementina Ciclev10021571m.g I 0.665
Gorai.008G126700 Gossypium raimondii Gorai.008G126700 I 0.665
VIT_15s0046g00170 Vitis vinifera VIT_15s0046g00170 I 0.665
TCM_005112 Theobroma cacao TCM_005112 I 0.665
Eucgr.D02390 Eucalyptus grandis Eucgr.D02390 I 0.665
mgf023205m Mimulus guttatus mgf023205m I 0.665
gene18691-v1.0-hybrid Fragaria vesca gene18691-v1.0-hybrid I 0.665
evm.TU.supercontig_96.57 Carica papaya evm.TU.supercontig_96.57 I 0.665
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.664
Eucgr.C01374 Eucalyptus grandis Eucgr.C01374 I 0.663
GSMUA_Achr10G17610_001 Musa acuminata GSMUA_Achr10G17610_001 I 0.663
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.663
Cucsa.304110 Cucumis sativus Cucsa.304110 I 0.663
Ciclev10032713m.g Citrus clementina Ciclev10032713m.g I 0.663
orange1.1g047269m.g Citrus sinensis orange1.1g047269m.g I 0.663
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.662
PRUPE_ppa009439mg Prunus persica PRUPE_ppa009439mg I 0.662
30068.m002544 Ricinus communis 30068.m002544 I 0.662
cassava34176.m1 Manihot esculenta cassava34176.m1 I 0.662
Pm018338 Prunus mume Pm018338 I 0.662
gene31098-v1.0-hybrid Fragaria vesca gene31098-v1.0-hybrid I 0.661
Gorai.004G151000 Gossypium raimondii Gorai.004G151000 I 0.661