Cagra.0483s0079 (Capsella grandiflora)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cagra.0483s0079 T285964_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0483s0079.1.p Myb 31 74

Links

Other Myb/SANT family TFs
Other Capsella grandiflora TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CPC Arabidopsis lyrata Al_scaffold_0005_3105 N 0.889
Carubv10018233m.g Capsella rubella Carubv10018233m.g N 0.888
Bostr.13158s0169 Boechera stricta Bostr.13158s0169 N 0.846
Thhalv10001695m.g Eutrema salsugineum Thhalv10001695m.g N 0.797
Bra039283 Brassica rapa Bra039283 N 0.797
Cagra.0050s0058 Capsella grandiflora Cagra.0050s0058 N 0.797
Carubv10024406m.g Capsella rubella Carubv10024406m.g N 0.797
Bra004539 Brassica rapa Bra004539 N 0.797
Bostr.25993s0128 Boechera stricta Bostr.25993s0128 N 0.797
Bo3g039260 Brassica oleracea Bo3g039260 N 0.797
CPC Arabidopsis thaliana AT2G46410 N 0.797
Bo4g009260 Brassica oleracea Bo4g009260 N 0.797
Bo4g197120 Brassica oleracea Bo4g197120 N 0.797
Eucgr.D02360 Eucalyptus grandis Eucgr.D02360 N 0.783
VIT_16s0050g02530 Vitis vinifera VIT_16s0050g02530 N 0.783
Thhalv10015741m.g Eutrema salsugineum Thhalv10015741m.g N 0.777
TRY Arabidopsis thaliana AT5G53200 N 0.777
Carubv10027412m.g Capsella rubella Carubv10027412m.g N 0.777
Bostr.26833s0960 Boechera stricta Bostr.26833s0960 N 0.777
Cagra.0084s0067 Capsella grandiflora Cagra.0084s0067 N 0.777
Bo3g022870 Brassica oleracea Bo3g022870 N 0.777
TRY Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001350 N 0.777
Aquca_013_00134 Aquilegia coerulea Aquca_013_00134 N 0.763
GSMUA_AchrUn_randomG19730_001 Musa acuminata GSMUA_AchrUn_randomG19730_001 N 0.763
GSMUA_Achr8G19880_001 Musa acuminata GSMUA_Achr8G19880_001 N 0.763
Cucsa.201970 Cucumis sativus Cucsa.201970 N 0.762
SapurV1A.2893s0010 Salix purpurea SapurV1A.2893s0010 N 0.761
SapurV1A.2295s0020 Salix purpurea SapurV1A.2295s0020 N 0.761
SapurV1A.0190s0070 Salix purpurea SapurV1A.0190s0070 N 0.761
MDP0000141474 Malus domestica MDP0000141474 N 0.759
PRUPE_ppa023853mg Prunus persica PRUPE_ppa023853mg N 0.759
Pm018400 Prunus mume Pm018400 N 0.759
Bo9g110930 Brassica oleracea Bo9g110930 N 0.756
MDP0000583070 Malus domestica MDP0000583070 N 0.749
gene19217-v1.0-hybrid Fragaria vesca gene19217-v1.0-hybrid N 0.749
POPTR_0002s17030 Populus trichocarpa POPTR_0002s17030 N 0.740
SapurV1A.0013s0580 Salix purpurea SapurV1A.0013s0580 N 0.737
orange1.1g034546m.g Citrus sinensis orange1.1g034546m.g N 0.736
Gorai.007G107400 Gossypium raimondii Gorai.007G107400 N 0.736
Eucgr.E00069 Eucalyptus grandis Eucgr.E00069 N 0.736
Ciclev10024111m.g Citrus clementina Ciclev10024111m.g N 0.736
cassava32987.m1 Manihot esculenta cassava32987.m1 N 0.736
TCM_005177 Theobroma cacao TCM_005177 N 0.736
Ca_15029 Cicer arietinum Ca_15029 N 0.736
MTR_5g009460 Medicago truncatula MTR_5g009460 N 0.736
Aquca_037_00095 Aquilegia coerulea Aquca_037_00095 N 0.734
Bra022637 Brassica rapa Bra022637 N 0.734
Bo2g046050 Brassica oleracea Bo2g046050 N 0.731
GSMUA_Achr1G05080_001 Musa acuminata GSMUA_Achr1G05080_001 N 0.729
Ciclev10006315m.g Citrus clementina Ciclev10006315m.g N 0.722
GLYMA01G43435 Glycine max GLYMA01G43435 N 0.721
POPTR_0014s09200 Populus trichocarpa POPTR_0014s09200 N 0.717
VIT_15s0046g01130 Vitis vinifera VIT_15s0046g01130 N 0.716
Lus10005949.g Linum usitatissimum Lus10005949.g N 0.715
GLYMA11G02061 Glycine max GLYMA11G02061 N 0.710
cassava46504.m1 Manihot esculenta cassava46504.m1 N 0.702
Gorai.001G155700 Gossypium raimondii Gorai.001G155700 N 0.701
Eucgr.E00851 Eucalyptus grandis Eucgr.E00851 N 0.696
GSMUA_Achr3G25090_001 Musa acuminata GSMUA_Achr3G25090_001 N 0.695
evm.TU.supercontig_3.55 Carica papaya evm.TU.supercontig_3.55 N 0.688
TCM_016428 Theobroma cacao TCM_016428 N 0.688
29742.m001447 Ricinus communis 29742.m001447 N 0.685
cassava10382.m1 Manihot esculenta cassava10382.m1 N 0.684
PGSC0003DMG400000212 Solanum tuberosum PGSC0003DMG400000212 N 0.683
Solyc01g095640.1 Solanum lycopersicum Solyc01g095640.1 N 0.683
Bostr.7365s0058 Boechera stricta Bostr.7365s0058 N 0.682
Cagra.1372s0017 Capsella grandiflora Cagra.1372s0017 N 0.682
Carubv10003403m.g Capsella rubella Carubv10003403m.g N 0.682
Pm019781 Prunus mume Pm019781 N 0.671
PRUPE_ppa024794mg Prunus persica PRUPE_ppa024794mg N 0.669
PDK_20s1335581g001 Phoenix dactylifera PDK_20s1335581g001 N 0.668
PDK_20s1307674g001 Phoenix dactylifera PDK_20s1307674g001 N 0.668
Aquca_028_00182 Aquilegia coerulea Aquca_028_00182 N 0.666
Bra026297 Brassica rapa Bra026297 N 0.661