Cagra.0917s0007 (Capsella grandiflora)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cagra.0917s0007 T285999_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAX3
M02700_2.00
Arabidopsis thaliana
SCACCTACCHCCN

NGGDGGTAGGTGS
SELEX
Mathelier et al.(2014)
MA0576.1
0.903 0.946
RAX3
M11043_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB84_01
0.903 0.946
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0917s0007.1.p Myb 14 62
Cagra.0917s0007.1.p Myb 68 113

Links

Other Myb/SANT family TFs
Other Capsella grandiflora TFs

478 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AALB006342 Anopheles albimanus AALB006342 I 0.000
AARA001120 Anopheles arabiensis AARA001120 I 0.000
AATE007772 Anopheles atroparvus AATE007772 I 0.000
ACEP12359 Atta cephalotes ACEP12359 I 0.000
ACHR009800 Anopheles christyi ACHR009800 I 0.000
ACUA027429 Anopheles culicifacies ACUA027429 I 0.000
ADAC004542 Anopheles darlingi ADAC004542 I 0.000
ADIR000964 Anopheles dirus ADIR000964 I 0.000
AFAF010901 Anopheles farauti AFAF010901 I 0.000
AFUN011579 Anopheles funestus AFUN011579 I 0.000
AGAP000057 Anopheles gambiae AGAP000057 I 0.000
Alligator_sinensis_CCG006492.1 Alligator sinensis Alligator_sinensis_CCG006492.1 I 0.000
ALUE_0001419501 Ascaris lumbricoides ALUE_0001419501 I 0.000
AMAM018366 Anopheles maculatus AMAM018366 I 0.000
AMEC016969 Anopheles melas AMEC016969 I 0.000
AMEM003247 Anopheles merus AMEM003247 I 0.000
AMIN002123 Anopheles minimus AMIN002123 I 0.000
ANCDUO_11516 Ancylostoma duodenale ANCDUO_11516 I 0.000
ASIS021176 Anopheles sinensis ASIS021176 I 0.000
ASTEI06196 Anopheles stephensi ASTEI06196 I 0.000
ASU_03705 Ascaris suum ASU_03705 I 0.000
BGLB002026 Biomphalaria glabrata BGLB002026 N 0.000
Bm1956 Brugia malayi Bm1956 I 0.000
CJA34444 Caenorhabditis japonica CJA34444 I 0.000
CLEC006620 Cimex lectularius CLEC006620 I 0.000
D915_05650 Fasciola hepatica D915_05650 N 0.000
D917_02818 Trichinella nativa D917_02818 I 0.000
DAPPUDRAFT_311028 Daphnia pulex DAPPUDRAFT_311028 I 0.000
DICVIV_04707 Dictyocaulus viviparus DICVIV_04707 I 0.000
EEL_0001009001 Elaeophora elaphi EEL_0001009001 I 0.000
ENSACAG00000011033 Anolis carolinensis ENSACAG00000011033 I 0.000
PAX5 Anolis carolinensis ENSACAG00000011646 I 0.000
pax2/5/8-b Ciona intestinalis ENSCING00000005977 I 0.000
pax8 Danio rerio ENSDARG00000015879 I 0.000
pax2a Danio rerio ENSDARG00000028148 I 0.000
pax2b Danio rerio ENSDARG00000032578 D 0.000
Pax8 Dipodomys ordii ENSDORG00000002606 I 0.000
Pax7 Dipodomys ordii ENSDORG00000011854 I 0.000
Pax5 Dipodomys ordii ENSDORG00000015818 I 0.000
PAX7 Homo sapiens ENSG00000009709 D 0.000
PAX5 Homo sapiens ENSG00000196092 D 0.000
pax8 Gasterosteus aculeatus ENSGACG00000016747 I 0.000
ENSGMOG00000000463 Gadus morhua ENSGMOG00000000463 I 0.000
ENSLACG00000013159 Latimeria chalumnae ENSLACG00000013159 I 0.000
ENSLOCG00000012825 Lepisosteus oculatus ENSLOCG00000012825 I 0.000
ENSLOCG00000015261 Lepisosteus oculatus ENSLOCG00000015261 I 0.000
PAX8 Microcebus murinus ENSMICG00000003265 I 0.000
ENSMODG00000025571 Monodelphis domestica ENSMODG00000025571 I 0.000
Pax5 Mus musculus ENSMUSG00000014030 D 0.000
ENSOANG00000029256 Ornithorhynchus anatinus ENSOANG00000029256 I 0.000
ENSONIG00000016065 Oreochromis niloticus ENSONIG00000016065 I 0.000
PAX8 Ochotona princeps ENSOPRG00000012910 I 0.000
pax8 Oryzias latipes ENSORLG00000007225 I 0.000
PAX7 Procavia capensis ENSPCAG00000005303 I 0.000
ENSPFOG00000003702 Poecilia formosa ENSPFOG00000003702 I 0.000
ENSPSIG00000012152 Pelodiscus sinensis ENSPSIG00000012152 I 0.000
PAX8 Pan troglodytes ENSPTRG00000012380 I 0.000
Pax5 Rattus norvegicus ENSRNOG00000024729 I 0.000
Pax8 Rattus norvegicus ENSRNOG00000026203 D 0.000
ENSSARG00000014324 Sorex araneus ENSSARG00000014324 I 0.000
ENSSSCG00000016229 Sus scrofa ENSSSCG00000016229 I 0.000
pax5 Tetraodon nigroviridis ENSTNIG00000005085 I 0.000
pax8 Tetraodon nigroviridis ENSTNIG00000009029 I 0.000
pax2b Takifugu rubripes ENSTRUG00000011987 I 0.000
ENSTRUG00000014051 Takifugu rubripes ENSTRUG00000014051 I 0.000
GF20618 Drosophila ananassae FBgn0097624 I 0.000
GH23966 Drosophila grimshawi FBgn0131423 I 0.000
GI14046 Drosophila mojavensis FBgn0136800 I 0.000
GL18401 Drosophila persimilis FBgn0156002 I 0.000
GM13025 Drosophila sechellia FBgn0167956 I 0.000
GJ13730 Drosophila virilis FBgn0200951 I 0.000
GK13586 Drosophila willistoni FBgn0215594 I 0.000
spa-sv Drosophila pseudoobscura FBgn0249275 I 0.000
HCOI01205400 Haemonchus contortus HCOI01205400 I 0.000
HelroG124549 Helobdella robusta HelroG124549 I 0.000
HHAL006987-PA Halyomorpha halys HHAL006987-PA I 0.000
Hsal_05017--XP_001122481.1_APIME Harpegnathos saltator Hsal_05017--XP_001122481.1_APIME I 0.000
L596_g7168 Steinernema carpocapsae L596_g7168 I 0.000
L889_g28670 Steinernema feltiae L889_g28670 I 0.000
L892_g26455 Steinernema scapterisci L892_g26455 I 0.000
L898_g18055 Steinernema monticolum L898_g18055 I 0.000
LLOJ002076 Lutzomyia longipalpis LLOJ002076 I 0.000
LOAG_00159 Loa loa LOAG_00159 I 0.000
LotgiG135549 Lottia gigantea LotgiG135549 I 0.000
MESCA003563 Megaselia scalaris MESCA003563 I 0.000
nDi.2.2.2.g01404 Dirofilaria immitis nDi.2.2.2.g01404 I 0.000
nLs.2.1.2.g05197 Litomosoides sigmodontis nLs.2.1.2.g05197 I 0.000
NV16807 Nasonia vitripennis NV16807 I 0.000
OFLC_0001261901 Onchocerca flexuosa OFLC_0001261901 I 0.000
PTRK_0001603600 Parastrongyloides trichosuri PTRK_0001603600 I 0.000
Sjc_0065980 Schistosoma japonicum Sjc_0065980 I 0.000
SMUV_0000412301 Syphacia muris SMUV_0000412301 I 0.000
SPAL_0000372000 Strongyloides papillosus SPAL_0000372000 I 0.000
SPER_0000498301 Spirometra erinaceieuropaei SPER_0000498301 I 0.000
SSLN_0001596201 Schistocephalus solidus SSLN_0001596201 I 0.000
SSTP_0000522800 Strongyloides stercoralis SSTP_0000522800 I 0.000
SVE_0227200 Strongyloides venezuelensis SVE_0227200 I 0.000
TELCIR_10899 Teladorsagia circumcincta TELCIR_10899 I 0.000
TELCIR_18859 Teladorsagia circumcincta TELCIR_18859 I 0.000
tetur29g01000 Tetranychus urticae tetur29g01000 I 0.000
TRE_0001207401 Trichobilharzia regenti TRE_0001207401 I 0.000
pax-2 Caenorhabditis elegans WBGene00003938 D 0.000
pax8 Xenopus tropicalis XB-GENE-483693 I 0.000
pax2.L Xenopus laevis XB-GENE-486805 I 0.000
pax5.L Xenopus laevis XB-GENE-865318 I 0.000