TF Information

Cagra.11216s0001 *(Capsella grandiflora)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	Cagra.11216s0001	T286014_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB24 M02311_2.00	Arabidopsis thaliana	RCCDAMYNN	NNRKTHGGY	PBM Weirauch et al.(2014) pTH8662	0.826	0.957
MYB05_ANTMA M11067_2.00	Antirrhinum majus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYB305_Q3	0.825	0.946
MYB57 M01072_2.00	Arabidopsis thaliana	RCCTAAYT	ARTTAGGY	PBM Sullivan et al.(2014) pTH9748	0.742	0.849
MYB57 M07059_2.00	Arabidopsis thaliana	YNTACCTAACTHHH	DDDAGTTAGGTANR	Dap-seq OMalley et al.(2016) MYB57_col_a	0.742	0.849
MYB57 M07060_2.00	Arabidopsis thaliana	ACCTAAY	RTTAGGT	Dap-seq OMalley et al.(2016) MYB57_colamp_a	0.742	0.849
MYB62 M07027_2.00	Arabidopsis thaliana	NHRCCTAAYTWNHNN	NNDNWARTTAGGYDN	Dap-seq OMalley et al.(2016) MYB62_col_a	0.661	0.763
MYB62 M07028_2.00	Arabidopsis thaliana	HNKRCCTAACTHH	DDAGTTAGGYMND	Dap-seq OMalley et al.(2016) MYB62_colamp_a	0.661	0.763
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Cagra.11216s0001.1.p	Myb	21	68	KGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTGKSCRLRWLNYL
Cagra.11216s0001.1.p	Myb	74	119	RGNITPEEQLIIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRI

Links
Other Myb/SANT family TFs
Other *Capsella grandiflora* TFs

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146 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action