Cagra.1655s0054 (Capsella grandiflora)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cagra.1655s0054 T286054_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1655s0054.1.p Myb 2 18
Cagra.1655s0054.1.p Myb 24 69

Links

Other Myb/SANT family TFs
Other Capsella grandiflora TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.17198s0001 Capsella grandiflora Cagra.17198s0001 N 0.827
Bra031041 Brassica rapa Bra031041 N 0.770
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.757
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.736
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.730
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.724
Cagra.1390s0010 Capsella grandiflora Cagra.1390s0010 I 0.723
MLOC_16981 Hordeum vulgare MLOC_16981 I 0.711
Pavir.Fa00877 Panicum virgatum Pavir.Fa00877 I 0.710
Pavir.J23620 Panicum virgatum Pavir.J23620 N 0.705
PDK_20s1376841g001 Phoenix dactylifera PDK_20s1376841g001 N 0.704
PDK_20s1338951g004 Phoenix dactylifera PDK_20s1338951g004 N 0.701
Gorai.013G139200 Gossypium raimondii Gorai.013G139200 I 0.700
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.700
MDP0000475808 Malus domestica MDP0000475808 N 0.697
SapurV1A.0552s0030 Salix purpurea SapurV1A.0552s0030 I 0.697
Pavir.J19088 Panicum virgatum Pavir.J19088 N 0.696
TT2 Arabidopsis thaliana AT5G35550 I 0.695
ATMYB48 Arabidopsis thaliana AT3G46130 I 0.695
Cagra.10637s0001 Capsella grandiflora Cagra.10637s0001 I 0.695
Bostr.18473s0331 Boechera stricta Bostr.18473s0331 I 0.695
BGIOSGA027658 Oryza indica BGIOSGA027658 N 0.694
mgf026463m Mimulus guttatus mgf026463m N 0.694
WER Arabidopsis thaliana AT5G14750 D 0.693
Bo5g131980 Brassica oleracea Bo5g131980 N 0.693
MYB86 Arabidopsis thaliana AT5G26660 I 0.692
BGIOSGA037085 Oryza indica BGIOSGA037085 N 0.691
GLYMA08G44950 Glycine max GLYMA08G44950 N 0.691
orange1.1g044587m.g Citrus sinensis orange1.1g044587m.g N 0.691
GLYMA16G00920 Glycine max GLYMA16G00920 I 0.691
SapurV1A.0177s0130 Salix purpurea SapurV1A.0177s0130 I 0.691
mgf021749m Mimulus guttatus mgf021749m N 0.687
GRMZM2G032180 Zea mays GRMZM2G032180 N 0.687
Pavir.Gb01276 Panicum virgatum Pavir.Gb01276 N 0.687
Cucsa.061660 Cucumis sativus Cucsa.061660 I 0.687
MYB24 Arabidopsis thaliana AT5G40350 D 0.686
evm.TU.contig_33658 Carica papaya evm.TU.contig_33658 N 0.685
BGIOSGA002307 Oryza indica BGIOSGA002307 N 0.685
MYB94 Arabidopsis thaliana AT3G47600 D 0.685
Cagra.2519s0060 Capsella grandiflora Cagra.2519s0060 N 0.683
Bostr.3125s0001 Boechera stricta Bostr.3125s0001 N 0.682
TCM_013983 Theobroma cacao TCM_013983 I 0.682
MYB114 Arabidopsis thaliana AT1G66380 I 0.682
MYB21 Arabidopsis thaliana AT3G27810 I 0.681
Traes_2BL_DAA2104F5 Triticum aestivum Traes_2BL_DAA2104F5 N 0.680
PRUPE_ppa008906mg Prunus persica PRUPE_ppa008906mg I 0.680
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.678
PK27824.1 Cannabis sativa PK27824.1 N 0.678
Traes_5AS_D9A4C1AB0 Triticum aestivum Traes_5AS_D9A4C1AB0 N 0.678
Gorai.001G268000 Gossypium raimondii Gorai.001G268000 I 0.675
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I 0.673
Eucgr.J02073 Eucalyptus grandis Eucgr.J02073 N 0.673
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I 0.673
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I 0.673
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I 0.673
MDP0000153773 Malus domestica MDP0000153773 N 0.673
MYB59 Arabidopsis thaliana AT5G59780 D 0.673
gene13970-v1.0-hybrid Fragaria vesca gene13970-v1.0-hybrid N 0.673
Cagra.1317s0038 Capsella grandiflora Cagra.1317s0038 N 0.673
Bostr.26833s0259 Boechera stricta Bostr.26833s0259 N 0.673
cassava11833.valid.m1 Manihot esculenta cassava11833.valid.m1 N 0.672
MLOC_17928 Hordeum vulgare MLOC_17928 I 0.671
Pavir.Ia02093 Panicum virgatum Pavir.Ia02093 N 0.671
OBART12G16130 Oryza barthii OBART12G16130 N 0.670
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.670
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.670
OGLUM12G17720 Oryza glumaepatula OGLUM12G17720 N 0.670
Traes_2DL_304E62CCE Triticum aestivum Traes_2DL_304E62CCE N 0.669
MLOC_56753 Hordeum vulgare MLOC_56753 I 0.669
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.669
PDK_20s1354851g002 Phoenix dactylifera PDK_20s1354851g002 N 0.667
Traes_5DS_1EF547639 Triticum aestivum Traes_5DS_1EF547639 N 0.666
Traes_5BS_D1C03C165 Triticum aestivum Traes_5BS_D1C03C165 N 0.666
MYB27 Arabidopsis thaliana AT3G53200 D 0.666
Traes_5AS_7D519210E Triticum aestivum Traes_5AS_7D519210E N 0.666
SapurV1A.0093s0250 Salix purpurea SapurV1A.0093s0250 I 0.665
AtMYB10 Arabidopsis thaliana AT3G12820 D 0.665
Bra009910 Brassica rapa Bra009910 N 0.665
MDP0000169874 Malus domestica MDP0000169874 N 0.664
MDP0000139931 Malus domestica MDP0000139931 N 0.664
Si003873m.g Setaria italica Si003873m.g N 0.663
TCM_021433 Theobroma cacao TCM_021433 I 0.663
Traes_2DS_EEE59C2E7 Triticum aestivum Traes_2DS_EEE59C2E7 N 0.663
BRADI2G11080 Brachypodium distachyon BRADI2G11080 I 0.663
Pavir.J24653 Panicum virgatum Pavir.J24653 N 0.663
BRADI4G09490 Brachypodium distachyon BRADI4G09490 N 0.662
OS01G0975300 Oryza sativa OS01G0975300 N 0.662
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.662
BRADI1G45510 Brachypodium distachyon BRADI1G45510 I 0.661
LjSGA_148662.1 Lotus japonicus LjSGA_148662.1 N 0.661