Cagra.3501s0113 (Capsella grandiflora)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cagra.3501s0113 T286117_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.3501s0113.1.p Myb 282 332

Links

Other Myb/SANT family TFs
Other Capsella grandiflora TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R004209 Calypte anna Aan_R004209 I 0.000
Afo_R012154 Aptenodytes forsteri Afo_R012154 I 0.000
Afo_R013359 Aptenodytes forsteri Afo_R013359 I 0.000
Brh_R004433 Buceros rhinoceros Brh_R004433 I 0.000
ENSAMXG00000005897 Astyanax mexicanus ENSAMXG00000005897 I 0.000
ENSAMXG00000010595 Astyanax mexicanus ENSAMXG00000010595 I 0.000
ENSAPLG00000009708 Anas platyrhynchos ENSAPLG00000009708 I 0.000
ENSAPLG00000015442 Anas platyrhynchos ENSAPLG00000015442 I 0.000
ENSLOCG00000010331 Lepisosteus oculatus ENSLOCG00000010331 I 0.000
ENSLOCG00000013738 Lepisosteus oculatus ENSLOCG00000013738 I 0.000
ENSONIG00000017217 Oreochromis niloticus ENSONIG00000017217 I 0.000
ENSPFOG00000006505 Poecilia formosa ENSPFOG00000006505 I 0.000
ENSTSYG00000003453 Tarsius syrichta ENSTSYG00000003453 I 0.000
ENSXMAG00000004071 Xiphophorus maculatus ENSXMAG00000004071 I 0.000
ENSXMAG00000011087 Xiphophorus maculatus ENSXMAG00000011087 I 0.000
irf2 Oryzias latipes ENSORLG00000008574 I 0.000
IRF2 Equus caballus ENSECAG00000007508 I 0.000
Irf2 Rattus norvegicus ENSRNOG00000009824 I 0.000
irf2 Danio rerio ENSDARG00000040465 I 0.000
IRF2 Meleagris gallopavo ENSMGAG00000006359 I 0.000
IRF2 Gallus gallus ENSGALG00000010642 I 0.000
Tal_R004238 Tyto alba Tal_R004238 I 0.000
txndc15 Takifugu rubripes ENSTRUG00000004321 I 0.000
txndc15 Tetraodon nigroviridis ENSTNIG00000019636 I 0.000
txndc15 Gasterosteus aculeatus ENSGACG00000020876 I 0.000
txndc15 Danio rerio ENSDARG00000043249 I 0.000
txndc15 Oryzias latipes ENSORLG00000001131 I 0.000