Carubv10001129m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10001129m.g T286209_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYR1
M02309_2.00
Arabidopsis thaliana
NKATNCBNNN

NNNVGNATMN
PBM
Weirauch et al.(2014)
pTH8859
0.909 1.000
MYR2
M02294_2.00
Arabidopsis thaliana
NKATDCBNN

NNVGHATMN
PBM
Weirauch et al.(2014)
pTH7097
0.888 0.957
MYR2
M07063_2.00
Arabidopsis thaliana
NNDAAKATTCYHHN

NDDRGAATMTTHNN
Dap-seq
OMalley et al.(2016)
At3g04030_col_a
0.888 0.957
MYR2
M07064_2.00
Arabidopsis thaliana
VRAAKATTCBHWNNN

NNNWDVGAATMTTYB
Dap-seq
OMalley et al.(2016)
At3g04030_colamp_a
0.888 0.957
AT3G24120
M00729_2.00
Arabidopsis thaliana
NNKATDCBNN

NNVGHATMNN
PBM
Chang et al.(2013)
pTH7086
0.795 0.809
UNE16
M01270_2.00
Arabidopsis thaliana
NWKATTCBNN

NNVGAATMWN
PBM
Lambert et al.(2019)
pTH9967
0.795 0.809
AT3G24120
M07085_2.00
Arabidopsis thaliana
HAKATTCB

VGAATMTD
Dap-seq
OMalley et al.(2016)
At3g24120_col_a
0.795 0.809
AT3G24120
M07086_2.00
Arabidopsis thaliana
NDRAAKATTCBHHN

NDDVGAATMTTYHN
Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a
0.795 0.809
PHL12
M01077_2.00
Arabidopsis thaliana
NWKATTCBNN

NNVGAATMWN
PBM
Sullivan et al.(2014)
pTH7098
0.753 0.809
PHL12
M07079_2.00
Arabidopsis thaliana
RGAATATTCYYTWN

NWARRGAATATTCY
Dap-seq
OMalley et al.(2016)
At3g12730_col_a
0.753 0.809
PHL12
M07080_2.00
Arabidopsis thaliana
NNRAAKATTCBHHN

NDDVGAATMTTYNN
Dap-seq
OMalley et al.(2016)
At3g12730_colamp_a
0.753 0.809
PHL7
M02292_2.00
Arabidopsis thaliana
NWGATDCBNN

NNVGHATCWN
PBM
Weirauch et al.(2014)
pTH7253
0.743 0.745
PK10342.1
M02351_2.00
Cannabis sativa
WAGATKCS

SGMATCTW
PBM
Weirauch et al.(2014)
pTH9489
0.743 0.745
PHL7
M07040_2.00
Arabidopsis thaliana
DRNAKATTCBNHNNN

NNNDNVGAATMTNYH
Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a
0.743 0.745
PHL7
M07041_2.00
Arabidopsis thaliana
VGAATATTCBNHH

DDNVGAATATTCB
Dap-seq
OMalley et al.(2016)
At2g01060_col
0.743 0.745
PHL11
M07134_2.00
Arabidopsis thaliana
NNRAAKATTCYHHN

NDDRGAATMTTYNN
Dap-seq
OMalley et al.(2016)
AT5G45580_col_a
0.722 0.766
PHL11
M07135_2.00
Arabidopsis thaliana
NRAAKATTCYHHNN

NNDDRGAATMTTYN
Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a
0.722 0.766
Q5IWM2_WHEAT
M11059_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB80_01
0.679 0.702
PHL1
M02310_2.00
Arabidopsis thaliana
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7122
0.669 0.723
PHL1
M07132_2.00
Arabidopsis thaliana
MDRGAATATTCBNWN

NWNVGAATATTCYHK
Dap-seq
OMalley et al.(2016)
At5g29000_col_a
0.669 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10001129m Myb 47 98
Carubv10001148m Myb 47 98

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

773 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_09148 Capronia coronata A1O1_09148 I 0.000
A1O3_04858 Capronia epimyces A1O3_04858 I 0.000
A1O5_10914 Cladophialophora psammophila A1O5_10914 I 0.000
A1O7_09058 Cladophialophora yegresii A1O7_09058 I 0.000
A1O9_08540 Exophiala aquamarina A1O9_08540 I 0.000
AB04255.1 Alternaria brassicicola AB04255.1 I 0.000
ACRE_050430 Acremonium chrysogenum ACRE_050430 I 0.000
AOL_s00004g467 Arthrobotrys oligospora AOL_s00004g467 I 0.000
AUEXF2481DRAFT_65039 Aureobasidium subglaciale AUEXF2481DRAFT_65039 I 0.000
BAUCODRAFT_67300 Baudoinia compniacensis BAUCODRAFT_67300 I 0.000
BBA_06378 Beauveria bassiana BBA_06378 I 0.000
Bcin08g04290 Botrytis cinerea Bcin08g04290 I 0.000
BGHDH14_bgh03672 Blumeria graminis BGHDH14_bgh03672 I 0.000
ACLA_075180 Aspergillus clavatus CADACLAG00007213 I 0.000
AFUA_2G16230 Aspergillus fumigatus CADAFUAG00003956 I 0.000
ATEG_02323 Aspergillus terreus CADATEAG00000176 I 0.000
NFIA_091480 Neosartorya fischeri CADNFIAG00006628 I 0.000
CCM_05770 Cordyceps militaris CCM_05770 I 0.000
CFIO01_12195 Colletotrichum fioriniae CFIO01_12195 I 0.000
CH063_10005 Colletotrichum higginsianum CH063_10005 I 0.000
CHGG_03330 Chaetomium globosum CHGG_03330 I 0.000
CIMG_09513 Coccidioides immitis CIMG_09513 I 0.000
CMQ_4569 Grosmannia clavigera CMQ_4569 I 0.000
COCC4DRAFT_73623 Bipolaris maydis COCC4DRAFT_73623 I 0.000
COCCADRAFT_3280 Bipolaris zeicola COCCADRAFT_3280 I 0.000
COCMIDRAFT_83159 Bipolaris oryzae COCMIDRAFT_83159 I 0.000
COCSADRAFT_317847 Bipolaris sorokiniana COCSADRAFT_317847 I 0.000
COCVIDRAFT_108446 Bipolaris victoriae COCVIDRAFT_108446 I 0.000
CPC735_018720 Coccidioides posadasii CPC735_018720 I 0.000
CPUR_06134 Claviceps purpurea CPUR_06134 I 0.000
CTHT_0023000 Chaetomium thermophilum CTHT_0023000 I 0.000
DOTSEDRAFT_69945 Dothistroma septosporum DOTSEDRAFT_69945 I 0.000
EPUS_05737 Endocarpon pusillum EPUS_05737 I 0.000
estExt_fgenesh1_pm.C_180056 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_180056 I 0.000
estExt_fgenesh2_pg.C_50693 Neurospora discreta estExt_fgenesh2_pg.C_50693 I 0.000
estExt_Genewise1.C_160187 Mycosphaerella fijiensis estExt_Genewise1.C_160187 I 0.000
estExt_Genewise1.C_sca_10_chr8_2_00756 Nectria haematococca estExt_Genewise1.C_sca_10_chr8_2_00756 I 0.000
EURHEDRAFT_452938 Aspergillus ruber EURHEDRAFT_452938 I 0.000
EV44_g1012 Erysiphe necator EV44_g1012 I 0.000
e_gw1.10.63.1 Mycosphaerella graminicola e_gw1.10.63.1 I 0.000
F503_02900 Ophiostoma piceae uamh F503_02900 I 0.000
FFUJ_08525 Fusarium fujikuroi FFUJ_08525 I 0.000
FGRRES_05399 Fusarium graminearum FGRRES_05399 I 0.000
FOXG_09505 Fusarium oxysporum FOXG_09505 I 0.000
FPSE_09315 Fusarium pseudograminearum FPSE_09315 I 0.000
FVEG_07130 Fusarium verticillioides FVEG_07130 I 0.000
G647_08016 Cladophialophora carrionii G647_08016 I 0.000
GGTG_12899 Gaeumannomyces graminis GGTG_12899 I 0.000
GLRG_08419 Colletotrichum graminicola GLRG_08419 I 0.000
GMDG_04891 Pseudogymnoascus destructans GMDG_04891 I 0.000
GSTUM_00001294001 Tuber melanosporum GSTUM_00001294001 I 0.000
H072_7005 Dactylellina haptotyla H072_7005 I 0.000
HMPREF1120_01035 Exophiala dermatitidis HMPREF1120_01035 I 0.000
HMPREF1541_03882 Cyphellophora europaea HMPREF1541_03882 I 0.000
HMPREF1624_05990 Sporothrix schenckii HMPREF1624_05990 I 0.000
LEMA_P107430.1 Leptosphaeria maculans LEMA_P107430.1 I 0.000
M437DRAFT_51622 Aureobasidium melanogenum M437DRAFT_51622 I 0.000
M438DRAFT_264300 Aureobasidium pullulans M438DRAFT_264300 I 0.000
MAPG_00573 Magnaporthe poae MAPG_00573 I 0.000
MBM_02119 Marssonina brunnea MBM_02119 I 0.000
MGG_00373 Magnaporthe oryzae MGG_00373 I 0.000
MPH_05791 Macrophomina phaseolina MPH_05791 I 0.000
MYCFIDRAFT_202252 Pseudocercospora fijiensis MYCFIDRAFT_202252 I 0.000
Mycgr3G48508 Zymoseptoria tritici Mycgr3G48508 I 0.000
MYCTH_2305142 Myceliophthora thermophila MYCTH_2305142 I 0.000
NCU06503 Neurospora crassa NCU06503 D 0.000
NechaG62953 Fusarium solani NechaG62953 I 0.000
OCS_04386 Ophiocordyceps sinensis OCS_04386 I 0.000
OIDMADRAFT_116081 Oidiodendron maius OIDMADRAFT_116081 I 0.000
Pc21g01800 Penicillium chrysogenum Pc21g01800 I 0.000
PCH_Pc21g01800 Penicillium rubens PCH_Pc21g01800 I 0.000
PDE_07758 Penicillium oxalicum PDE_07758 I 0.000
PEX1_034950 Penicillium expansum PEX1_034950 I 0.000
PFICI_05888 Pestalotiopsis fici PFICI_05888 I 0.000
PITC_083090 Penicillium italicum PITC_083090 I 0.000
PMAA_038080 Talaromyces marneffei PMAA_038080 I 0.000
PMAA_038080 Penicillium marneffei PMAA_038080 I 0.000
PODANS_7_7860 Podospora anserina PODANS_7_7860 I 0.000
PTRG_05513 Pyrenophora triticirepentis PTRG_05513 I 0.000
PTT_11782 Pyrenophora teres PTT_11782 I 0.000
PV04_09644 Capronia semiimmersa PV04_09644 I 0.000
PV05_00271 Exophiala xenobiotica PV05_00271 I 0.000
PV06_07387 Exophiala oligosperma PV06_07387 I 0.000
PV07_00073 Cladophialophora immunda PV07_00073 I 0.000
PV08_01606 Exophiala spinifera PV08_01606 I 0.000
PV09_05002 Verruconis gallopava PV09_05002 I 0.000
PV10_05179 Exophiala mesophila PV10_05179 I 0.000
PV11_03237 Exophiala sideris PV11_03237 I 0.000
PVAR5_0273 Byssochlamys spectabilis PVAR5_0273 I 0.000
S40285_00403 Stachybotrys chlorohalonata S40285_00403 I 0.000
S40288_00174 Stachybotrys chartarum S40288_00174 I 0.000
SAPIO_CDS5390 Scedosporium apiospermum SAPIO_CDS5390 I 0.000
SBOR_3205 Sclerotinia borealis SBOR_3205 I 0.000
SEPMUDRAFT_147252 Sphaerulina musiva SEPMUDRAFT_147252 I 0.000
SETTUDRAFT_19859 Setosphaeria turcica SETTUDRAFT_19859 I 0.000
SMAC_05337 Sordaria macrospora SMAC_05337 I 0.000
SPBR_00205 Sporothrix brasiliensis SPBR_00205 I 0.000
SS1G_03115 Sclerotinia sclerotiorum SS1G_03115 I 0.000
THITE_2118864 Thielavia terrestris THITE_2118864 I 0.000
TRIATDRAFT_232454 Trichoderma atroviride TRIATDRAFT_232454 I 0.000
TRIREDRAFT_112342 Trichoderma reesei TRIREDRAFT_112342 I 0.000
TRIVIDRAFT_51124 Trichoderma virens TRIVIDRAFT_51124 I 0.000
TSTA_053940 Talaromyces stipitatus TSTA_053940 I 0.000
UCRNP2_4875 Neofusicoccum parvum UCRNP2_4875 I 0.000
VHEMI01492 Torrubiella hemipterigena VHEMI01492 I 0.000
W97_08751 Coniosporium apollinis W97_08751 I 0.000
Z517_01898 Fonsecaea pedrosoi Z517_01898 I 0.000
Z518_03210 Rhinocladiella mackenziei Z518_03210 I 0.000
Z519_11455 Cladophialophora bantiana Z519_11455 I 0.000