TF Information

Carubv10001525m.g *(Capsella rubella)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	Carubv10001525m.g	T286220_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
SRM1 M02307_2.00	Arabidopsis thaliana	NNHNATCNN	NNGATNDNN	PBM Weirauch et al.(2014) pTH7080	0.853	0.967
SRM1 M07121_2.00	Arabidopsis thaliana	YCTTATCYWHW	WDWRGATAAGR	Dap-seq OMalley et al.(2016) At5g08520_colamp_a	0.853	0.967
SRM1 M07122_2.00	Arabidopsis thaliana	YCTTATCYWHWWH	DWWDWRGATAAGR	Dap-seq OMalley et al.(2016) At5g08520_col_b	0.853	0.967
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Carubv10001525m	Myb	119	164	AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYF
Carubv10001565m	Myb	119	164	AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYF

Links
Other Myb/SANT family TFs
Other *Capsella rubella* TFs

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52 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action