Carubv10001741m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10001741m.g T286224_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10001741m Myb 142 189

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.7888s0001 Capsella grandiflora Cagra.7888s0001 N 0.909
Bostr.6251s0088 Boechera stricta Bostr.6251s0088 I 0.867
Thhalv10014410m.g Eutrema salsugineum Thhalv10014410m.g I 0.829
fgenesh1_pg.C_scaffold_6000079 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6000079 N 0.826
AT5G01200 Arabidopsis thaliana AT5G01200 N 0.822
Bo2g002350 Brassica oleracea Bo2g002350 I 0.797
Bra028892 Brassica rapa Bra028892 I 0.772
Lus10028264.g Linum usitatissimum Lus10028264.g I 0.674
Lus10009884.g Linum usitatissimum Lus10009884.g I 0.674
Bo3g018460 Brassica oleracea Bo3g018460 I 0.673
Bra006741 Brassica rapa Bra006741 I 0.673
evm.TU.supercontig_1130.1 Carica papaya evm.TU.supercontig_1130.1 I 0.672
Gorai.006G180900 Gossypium raimondii Gorai.006G180900 I 0.669
Thhalv10014270m.g Eutrema salsugineum Thhalv10014270m.g I 0.668
Bra002610 Brassica rapa Bra002610 I 0.668
Bo4g187390 Brassica oleracea Bo4g187390 I 0.665
Bra017138 Brassica rapa Bra017138 I 0.665
Lus10014837.g Linum usitatissimum Lus10014837.g I 0.664