TF Information

Carubv10009761m.g *(Capsella rubella)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	Carubv10009761m.g	T286290_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB3 M02288_2.00	Arabidopsis thaliana	NNYACCTACCN	NGGTAGGTRNN	PBM Weirauch et al.(2014) pTH7125	0.909	0.978
MYB4 M02303_2.00	Arabidopsis thaliana	YACCWACY	RGTWGGTR	PBM Weirauch et al.(2014) pTH7075	0.824	0.892
MYB4 M07115_2.00	Arabidopsis thaliana	NYYACCWAMHWHNDD	HHNDWDKTWGGTRRN	Dap-seq OMalley et al.(2016) MYB4_col200_a	0.824	0.892
Q2TCH0_PETHY M11072_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$PH4_01	0.695	0.720
MYB51 M07010_2.00	Arabidopsis thaliana	NHNHHNHNNNYYYACCWACYW	WRGTWGGTRRRNNNDNDDNDN	Dap-seq OMalley et al.(2016) MYB51_col_a	0.684	0.742
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Carubv10009761m	Myb	61	108	KGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMNYL
Carubv10009761m	Myb	114	159	RGNFSEDEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHI

Links
Other Myb/SANT family TFs
Other *Capsella rubella* TFs

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610 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action