Carubv10012991m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10012991m.g T286323_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10012991m Myb 359 377
Carubv10012991m Myb 453 500
Carubv10012991m Myb 506 552
Carubv10012991m Myb 557 603
Carubv10012991m Myb 609 654
Carubv10013308m Myb 126 144
Carubv10013308m Myb 220 267
Carubv10013308m Myb 273 319
Carubv10013308m Myb 324 370
Carubv10013308m Myb 376 421
Carubv10013309m Myb 126 144
Carubv10013309m Myb 220 267
Carubv10013309m Myb 273 319
Carubv10013309m Myb 324 370
Carubv10013309m Myb 376 421

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.19424s0860 Boechera stricta Bostr.19424s0860 N 0.867
MYB4R1 Arabidopsis thaliana AT3G18100 N 0.793
MYB4R1 Arabidopsis lyrata fgenesh2_kg.3__2002__AT3G18100.1 N 0.787
scaffold_703601.1 Arabidopsis lyrata scaffold_703601.1 N 0.741
Cagra.0104s0003 Capsella grandiflora Cagra.0104s0003 N 0.711
Bo00828s010 Brassica oleracea Bo00828s010 N 0.672