Carubv10022245m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10022245m.g T286415_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10022245m Myb 10 48
Carubv10022245m Myb 40 85

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I 0.716
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I 0.696
Bo6g100940 Brassica oleracea Bo6g100940 I 0.687
Bra004162 Brassica rapa Bra004162 I 0.684
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I 0.684
Bra039763 Brassica rapa Bra039763 I 0.684
MYB114 Arabidopsis thaliana AT1G66380 I 0.684
Bo6g099880 Brassica oleracea Bo6g099880 I 0.684
Bo00835s060 Brassica oleracea Bo00835s060 I 0.684
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I 0.680
Bra001917 Brassica rapa Bra001917 I 0.674
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I 0.672
MYB90 Arabidopsis thaliana AT1G66390 I 0.669
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I 0.669
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I 0.667
Carubv10020856m.g Capsella rubella Carubv10020856m.g I 0.667
MYB75 Arabidopsis thaliana AT1G56650 I 0.663