Carubv10023675m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10023675m.g T286423_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ASR3
M07053_2.00
Arabidopsis thaliana
DNNNNHHWNDRCCCTWAW

WTWAGGGYHNWDDNNNNH
Dap-seq
OMalley et al.(2016)
AT2G33550_col_a
0.870 0.978
ASR3
M07054_2.00
Arabidopsis thaliana
NHWDDTRCCCTWMW

WKWAGGGYAHHWDN
Dap-seq
OMalley et al.(2016)
AT2G33550_colamp_a
0.870 0.978
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10023675m Myb 39 106
Carubv10023684m Myb 39 106

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

Invalid Input OrderBy

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action