Carubv10023736m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10023736m.g T286425_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT2G38090
M07055_2.00
Arabidopsis thaliana
HHBAWNYTTATCYWNWHYNBN

NVNRDWNWRGATAARNWTVDD
Dap-seq
OMalley et al.(2016)
At2g38090_col_a
0.902 0.979
PK27693.1
M01285_2.00
Cannabis sativa
NNYTATCBNN

NNVGATARNN
PBM
Lambert et al.(2019)
pTH11302
0.785 0.883
PK27213.1
M01284_2.00
Cannabis sativa
NHWATCNNNN

NNNNGATWDN
PBM
Lambert et al.(2019)
pTH10196
0.736 0.819
PK27213.1
M02356_2.00
Cannabis sativa
NHHATCNNNN

NNNNGATDDN
PBM
Weirauch et al.(2014)
pTH9600
0.736 0.819
AT5G58900
M07146_2.00
Arabidopsis thaliana
HHWWYCTTATCYWHW

WDWRGATAAGRWWDD
Dap-seq
OMalley et al.(2016)
At5g58900_col_a
0.661 0.809
AT5G58900
M07147_2.00
Arabidopsis thaliana
HWYMTTATCHWNWWH

DWWNWDGATAAKRWD
Dap-seq
OMalley et al.(2016)
At5g58900_colamp_a
0.661 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10023736m Myb 140 187

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
col-22 Neurospora crassa NCU04390 D 0.000
estExt_fgenesh1_pg.C_30899 Cryphonectria parasitica estExt_fgenesh1_pg.C_30899 I 0.000
SETTUDRAFT_31870 Setosphaeria turcica SETTUDRAFT_31870 I 0.000
SAPIO_CDS7052 Scedosporium apiospermum SAPIO_CDS7052 I 0.000
S40288_08454 Stachybotrys chartarum S40288_08454 I 0.000
S40285_05724 Stachybotrys chlorohalonata S40285_05724 I 0.000
PVAR5_1489 Byssochlamys spectabilis PVAR5_1489 I 0.000
PODANS_3_3810 Podospora anserina PODANS_3_3810 I 0.000
NEUTE1DRAFT_60791 Neurospora tetrasperma NEUTE1DRAFT_60791 I 0.000
NechaG66570 Fusarium solani NechaG66570 I 0.000
MYCTH_2299337 Myceliophthora thermophila MYCTH_2299337 I 0.000
SMAC_01754 Sordaria macrospora SMAC_01754 I 0.000
SPBR_05511 Sporothrix brasiliensis SPBR_05511 I 0.000
TRIATDRAFT_266867 Trichoderma atroviride TRIATDRAFT_266867 I 0.000
estExt_Genewise1Plus.C_sca_18_chr2_1_01639 Nectria haematococca estExt_Genewise1Plus.C_sca_18_chr2_1_01639 I 0.000
estExt_Genewise1.C_30584 Neurospora discreta estExt_Genewise1.C_30584 I 0.000
X797_008007 Metarhizium robertsii X797_008007 I 0.000
VHEMI03392 Torrubiella hemipterigena VHEMI03392 I 0.000
VDBG_00800 Verticillium alfalfae VDBG_00800 I 0.000
UV8b_1050 Ustilaginoidea virens UV8b_1050 I 0.000
UCRPA7_6855 Togninia minima UCRPA7_6855 I 0.000
TRIVIDRAFT_192982 Trichoderma virens TRIVIDRAFT_192982 I 0.000
TRIREDRAFT_55759 Trichoderma reesei TRIREDRAFT_55759 I 0.000
MGU_10634 Metarhizium guizhouense MGU_10634 I 0.000
MGG_01777 Magnaporthe oryzae MGG_01777 I 0.000
MBR_07954 Metarhizium brunneum MBR_07954 I 0.000
CTHT_0030250 Chaetomium thermophilum CTHT_0030250 I 0.000
CSUB01_05797 Colletotrichum sublineola CSUB01_05797 I 0.000
Cob_03852 Colletotrichum orbiculare Cob_03852 I 0.000
CMQ_895 Grosmannia clavigera CMQ_895 I 0.000
CHGG_04873 Chaetomium globosum CHGG_04873 I 0.000
CH063_14099 Colletotrichum higginsianum CH063_14099 I 0.000
CGGC5_12955 Colletotrichum gloeosporioides CGGC5_12955 I 0.000
CFIO01_00482 Colletotrichum fioriniae CFIO01_00482 I 0.000
BBA_05197 Beauveria bassiana BBA_05197 I 0.000
ACRE_019720 Acremonium chrysogenum ACRE_019720 I 0.000
F503_05042 Ophiostoma piceae uamh F503_05042 I 0.000
FFUJ_04464 Fusarium fujikuroi FFUJ_04464 I 0.000
MAM_06160 Metarhizium album MAM_06160 I 0.000
MAJ_04708 Metarhizium majus MAJ_04708 I 0.000
MAC_09133 Metarhizium acridum MAC_09133 I 0.000
HMPREF1624_04110 Sporothrix schenckii HMPREF1624_04110 I 0.000
GLRG_08311 Colletotrichum graminicola GLRG_08311 I 0.000
GGTG_02924 Gaeumannomyces graminis GGTG_02924 I 0.000
FVEG_04149 Fusarium verticillioides FVEG_04149 I 0.000
FPSE_05872 Fusarium pseudograminearum FPSE_05872 I 0.000
FOXG_06298 Fusarium oxysporum FOXG_06298 I 0.000
FGRRES_09594 Fusarium graminearum FGRRES_09594 I 0.000
VDBG_00800 Verticillium albo atrum VDBG_00800 I 0.000