Carubv10027519m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10027519m.g T286462_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10027519m Myb 815 874

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00009p00241540 Amborella trichopoda AMTR_s00009p00241540 N 0.744
Bo3g103450 Brassica oleracea Bo3g103450 N 0.867
Bostr.0568s0468 Boechera stricta Bostr.0568s0468 N 0.867
Bra038629 Brassica rapa Bra038629 N 0.867
Cagra.0248s0020 Capsella grandiflora Cagra.0248s0020 N 0.909
Ciclev10018763m.g Citrus clementina Ciclev10018763m.g N 0.698
Cla019560 Citrullus lanatus Cla019560 N 0.712
Cucsa.157420 Cucumis sativus Cucsa.157420 N 0.712
emb2746 Vitis vinifera VIT_17s0000g01640 N 0.771
emb2746 Arabidopsis thaliana AT5G63420 N 0.889
evm.TU.supercontig_13.140 Carica papaya evm.TU.supercontig_13.140 N 0.676
gene06358-v1.0-hybrid Fragaria vesca gene06358-v1.0-hybrid N 0.772
gene06360-v1.0-hybrid Fragaria vesca gene06360-v1.0-hybrid N 0.772
Gorai.001G059600 Gossypium raimondii Gorai.001G059600 N 0.724
Lus10016758.g Linum usitatissimum Lus10016758.g N 0.749
MDP0000313526 Malus domestica MDP0000313526 N 0.720
MDP0000574910 Malus domestica MDP0000574910 N 0.720
mgf010338m Mimulus guttatus mgf010338m N 0.666
orange1.1g016319m.g Citrus sinensis orange1.1g016319m.g N 0.696
orange1.1g040954m.g Citrus sinensis orange1.1g040954m.g N 0.698
Pm024489 Prunus mume Pm024489 N 0.754
POPTR_0012s09780 Populus trichocarpa POPTR_0012s09780 N 0.760
PRUPE_ppa001238mg Prunus persica PRUPE_ppa001238mg N 0.754
SapurV1A.0168s0020 Salix purpurea SapurV1A.0168s0020 N 0.676
SapurV1A.0841s0060 Salix purpurea SapurV1A.0841s0060 N 0.751
Thhalv10003624m.g Eutrema salsugineum Thhalv10003624m.g N 0.867